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https://github.com/kitwaremedical/itkcontourinterpolation

An implementation of morphological contour interpolation
https://github.com/kitwaremedical/itkcontourinterpolation

interpolation-methods itk-module segmentation

Last synced: about 2 months ago
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An implementation of morphological contour interpolation

Host: GitHub
URL: https://github.com/kitwaremedical/itkcontourinterpolation
Owner: KitwareMedical
License: apache-2.0
Created: 2015-04-24T18:24:27.000Z (over 9 years ago)
Default Branch: main
Last Pushed: 2024-09-18T02:20:24.000Z (4 months ago)
Last Synced: 2024-11-07T05:09:03.272Z (about 2 months ago)
Topics: interpolation-methods, itk-module, segmentation
Language: C++
Homepage: http://hdl.handle.net/10380/3563
Size: 3.15 MB
Stars: 30
Watchers: 8
Forks: 13
Open Issues: 5
Metadata Files:
- Readme: README.md
- License: LICENSE

Awesome Lists containing this project

README

# ITKMorphologicalContourInterpolation

![Build, test, package](https://github.com/KitwareMedical/ITKMorphologicalContourInterpolation/workflows/Build,%20test,%20package/badge.svg)

[![PyPI](https://img.shields.io/pypi/v/itk-morphologicalcontourinterpolation.svg)](https://pypi.python.org/pypi/itk-morphologicalcontourinterpolation)

[![License](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://github.com/KitwareMedical/ITKMorphologicalContourInterpolation/blob/master/LICENSE)

## Overview

An [ITK](https://itk.org)-based implementation of morphological contour interpolation based off the paper:

Albu AB1, Beugeling T, Laurendeau D.
"A morphology-based approach for interslice interpolation of anatomical slices from volumetric images."
IEEE Trans Biomed Eng.
2008 Aug;55(8):2022-38.
doi: 10.1109/TBME.2008.921158.

👨‍💻 [`Live API Demo`] ✨

Documentation can be found in the [Insight Journal article](https://www.insight-journal.org/browse/publication/977):

Zukić D., Vicory J., McCormick M., Wisse L., Gerig G., Yushkevich P., Aylward S.
"ND Morphological Contour Interpolation",
The Insight Journal. January-December, 2016.
https://hdl.handle.net/10380/3563
https://insight-journal.org/browse/publication/977

- 🕮 [`Wasm Python Documentation`] 📚
- 🕮 [`JavaScript Documentation`] 📚

## Installation

### Python

To install the wasm Python packages:

```sh
pip install itkwasm-morphological-contour-interpolation
```

To install the native Python packages:

```sh
python -m pip install --upgrade pip
python -m pip install itk-morphologicalcontourinterpolation
```

### JavaScript

Install the JavaScript/TypeScript package:

```sh
npm install @itk-wasm/morphological-contour-interpolation
```

### C++

Since ITK 4.11.0, this module is available in the ITK source tree as a remote module. To enable it, set:

```
Module_MorphologicalContourInterpolation:BOOL=ON
```

in ITK's CMake build configuration.

## License

This software is distributed under the Apache 2.0 license. Please see the *LICENSE* file for details.

## Acknowledgements

This work is supported by NIH grant R01 EB014346, "Continued development and maintenance of the ITK-SNAP 3D image segmentation software."

[`Live API Demo`]: https://kitwaremedical.github.io/ITKContourInterpolation/ts/app/
[`Wasm Python Documentation`]: https://kitwaremedical.github.io/ITKContourInterpolation/py/docs/
[`JavaScript Documentation`]: https://kitwaremedical.github.io/ITKContourInterpolation/ts/docs/