https://github.com/lauraluebbert/delphy_workflows

https://github.com/lauraluebbert/delphy_workflows

Last synced: 2 months ago
JSON representation

• Host: GitHub
• URL: https://github.com/lauraluebbert/delphy_workflows
• Owner: lauraluebbert
• License: bsd-2-clause
• Created: 2024-09-12T16:11:24.000Z (9 months ago)
• Default Branch: main
• Last Pushed: 2025-03-10T18:13:20.000Z (3 months ago)
• Last Synced: 2025-03-10T19:28:20.495Z (3 months ago)
• Language: Jupyter Notebook
• Size: 1.41 MB
• Stars: 1
• Watchers: 1
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

        
Download data from NCBI virus:  

https://colab.research.google.com/github/lauraluebbert/delphy_workflows/blob/main/ncbi_virus_data_download.ipynb

Download data from NCBI virus and create a phylogenetic tree with Delphy:  

https://colab.research.google.com/github/lauraluebbert/delphy_workflows/blob/main/delphy_workflow.ipynb

Delphy workflow tutorial (blank notebook):    

Temporary: https://colab.research.google.com/github/lauraluebbert/delphy/blob/main/tutorials/delphy_workflow.ipynb  

Soon: https://colab.research.google.com/github/broadinstitute/delphy/blob/main/tutorials/delphy_workflow.ipynb  

Delphy workflow tutorial (SARS-CoV-2 example):    

Temporary: https://colab.research.google.com/github/lauraluebbert/delphy/blob/main/tutorials/delphy_workflow_example.ipynb  

Soon: https://colab.research.google.com/github/broadinstitute/delphy/blob/main/tutorials/delphy_workflow_example.ipynb