https://github.com/lidaof/g3d

Genomics 3D Visualizer
https://github.com/lidaof/g3d

3d-structure genome webgl

Last synced: about 1 month ago
JSON representation

Genomics 3D Visualizer

• Host: GitHub
• URL: https://github.com/lidaof/g3d
• Owner: lidaof
• Created: 2019-08-27T21:00:26.000Z (over 5 years ago)
• Default Branch: master
• Last Pushed: 2024-06-14T15:21:47.000Z (11 months ago)
• Last Synced: 2025-04-10T15:04:44.792Z (about 1 month ago)
• Topics: 3d-structure, genome, webgl
• Language: Python
• Homepage: https://g3dv.now.sh/
• Size: 232 MB
• Stars: 12
• Watchers: 2
• Forks: 2
• Open Issues: 10
• Metadata Files:
  • Readme: README.md

Awesome Lists containing this project

README

        
# Genomics 3D visualizer tool sets

Go to each sub folder and check the documentation of each tool. Documentations are also available at [read the docs](https://g3d.readthedocs.io/en/latest/).

## g3dtools

This folder contains the command line tool dealing with .g3d format file.

## g3djs

This is the JavaScript API package for dealing with reading .g3d format file.

## g3dv

A frontend library based on [Vue.js](https://vuejs.org/) display .g3d file using [three.js](https://threejs.org/) engine.

-   Single mesh mode, all meshes mode

-   Customization (color, line width etc)

-   Walk mode

-   Clickable label to highight

-   Screenshot (w/ and w/o label)

-   Performance (high FPS)

### Try genomics 3D structure in AR mode

-   Please use your phone's camera point the QR code in the image below, Safari will popup and try to open our website,

    and will ask if allow to use the camera, please `Allow`

![QR code](/docs/_static/patt_qr.png?raw=true 'Marker and QR code')

-   then point the camera again to the Marker part (St. Louis Arch), and you will see the 3D structure in AR.

![G3D AR](/docs/_static/g3d_ar.jpg?raw=true 'AR mode')

## Questions

Please submit an [issue request](https://github.com/lidaof/g3d/issues), and we will get back to you asap.