https://github.com/lieberinstitute/speaqeasy
SPEAQeasy: portable LIBD RNA-seq pipeline using Nextflow. Check http://research.libd.org/SPEAQeasy-example/ for an example on how to use this pipeline and analyze the resulting output files.
https://github.com/lieberinstitute/speaqeasy
hisat2 nextflow pipeline rna-seq-pipeline rnaseq rstats speaqeasy
Last synced: 7 months ago
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SPEAQeasy: portable LIBD RNA-seq pipeline using Nextflow. Check http://research.libd.org/SPEAQeasy-example/ for an example on how to use this pipeline and analyze the resulting output files.
- Host: GitHub
- URL: https://github.com/lieberinstitute/speaqeasy
- Owner: LieberInstitute
- License: mit
- Created: 2018-02-13T19:58:06.000Z (over 7 years ago)
- Default Branch: master
- Last Pushed: 2025-03-11T19:56:55.000Z (7 months ago)
- Last Synced: 2025-03-11T20:34:38.341Z (7 months ago)
- Topics: hisat2, nextflow, pipeline, rna-seq-pipeline, rnaseq, rstats, speaqeasy
- Language: HTML
- Homepage: http://lieberinstitute.github.io/SPEAQeasy
- Size: 770 MB
- Stars: 6
- Watchers: 12
- Forks: 4
- Open Issues: 20
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Metadata Files:
- Readme: README.md
- License: LICENSE
- Code of conduct: .github/CODE_OF_CONDUCT.md