https://github.com/lmdu/biohub
Bioinformatics tools for biology analysis
https://github.com/lmdu/biohub
Last synced: 3 months ago
JSON representation
Bioinformatics tools for biology analysis
- Host: GitHub
- URL: https://github.com/lmdu/biohub
- Owner: lmdu
- Created: 2016-11-06T15:01:17.000Z (over 8 years ago)
- Default Branch: master
- Last Pushed: 2017-10-07T06:54:55.000Z (over 7 years ago)
- Last Synced: 2025-02-03T14:15:38.190Z (4 months ago)
- Size: 1.95 KB
- Stars: 1
- Watchers: 2
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
Awesome Lists containing this project
README
# Bioinformatics tools for biology analysis
## Transcriptome
[TransRate](https://github.com/Blahah/transrate) - reference-free quality assessment of de novo transcriptome assemblies [10.1101/gr.196469.115](http://dx.doi.org/10.1101/gr.196469.115)
## Gene Ontology
[A-DaGO-Fun](http://web.cbio.uct.ac.za/ITGOM/adagofun/) - An adaptable Gene Ontology semantic similarity based functional analysis tool [10.1093/bioinformatics/btv590](http://dx.doi.org/10.1093/bioinformatics/btv590)
[GOplot](https://wencke.github.io/) - an R package for visually combining expression data with functional analysis [10.1093/bioinformatics/btv30](http://dx.doi.org/10.1093/bioinformatics/btv300)
## Plotting
[Rodeo](http://www.yhat.com/products/rodeo) - An integractive environment built for analyzing data using python
## Database
[DisGeNET](http://www.disgenet.org/web/DisGeNET/menu/home) - a comprehensive platform integrating information on human disease-associated genes and variants [10.1093/nar/gkw943](http://dx.doi.org/10.1093/nar/gkw943)