https://github.com/lpsinger/modulesets
Module sets and configuration files for building LIGO data analysis software and open source astronomy software with jhbuild <https://live.gnome.org/Jhbuild>.
https://github.com/lpsinger/modulesets
Last synced: 9 months ago
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Module sets and configuration files for building LIGO data analysis software and open source astronomy software with jhbuild <https://live.gnome.org/Jhbuild>.
- Host: GitHub
- URL: https://github.com/lpsinger/modulesets
- Owner: lpsinger
- Created: 2012-12-20T02:26:43.000Z (about 13 years ago)
- Default Branch: master
- Last Pushed: 2018-10-19T08:37:49.000Z (about 7 years ago)
- Last Synced: 2025-03-25T05:53:17.451Z (9 months ago)
- Language: Python
- Homepage: http://lpsinger.github.io/modulesets/
- Size: 77.1 KB
- Stars: 1
- Watchers: 2
- Forks: 7
- Open Issues: 2
-
Metadata Files:
- Readme: README.md
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README
JHBuild modulesets for LIGO and open-source astronomy software
==============================================================
This is my personal collection of JHBuild ()
modules for automating build and installation of bleeding-edge packages for
LIGO data analysis and open source astronomy.
As a taste, installing all of lalsuite and the attendant Python packages
one-by-one becomes just:
$ jhbuild build lalsuite
Or, if you'd rather see a progress bar instead of all of the build output,
you can add the `-q` flag:
$ jhbuild build -q lalsuite
And entering the preconfigured shell with `PATH`, `PKG_CONFIG_PATH`,
`PYTHONPATH`, etc. preconfigured is just:
$ jhbuild shell
Instructions
------------
To use, first clone this repository into your home directory under
`~/modulesets` as follows:
$ git clone git://github.com/lpsinger/modulesets.git ~/modulesets
Next, clone and install JHBuild as follows (adapted from
):
$ mkdir -p ~/src && git clone git://git.gnome.org/jhbuild ~/src/jhbuild
$ cd ~/src/jhbuild
$ ./autogen.sh
$ make
$ make install
Optionally, add the following line to your login script so that the `jhbuild`
command is in your `PATH`:
export PATH=$PATH:~/.local/bin
Remember to log out and log back in for the new environment variable to take
effect. Next, symlink the bundled JHBuild configuration file to
`~/.config/jhbuildrc`:
$ mkdir -p ~/.config && cd ~/.config && ln -s ~/modulesets/jhbuildrc
Finally, build `lalsuite` with:
$ jhbuild build lalsuite
To start a shell with your newly built packages in the environment, run:
$ jhbuild shell
Experimental Support for Intel C Compiler (ICC)
-----------------------------------------------
There is now experimental support for compiling the LIGO/Virgo software stack
(LALSuite) using the Intel C Compiler (`icc`), which is available on LIGO Data
Grid computing clusters. To enable building with `icc`, add the line
`icc = True` to your jhbuild configuration script as follows:
$ echo 'icc = True' >> ~/.config/my.jhbuildrc
MacPorts
--------
For building LALSuite on [MacPorts](https://www.macports.org), I suggest using
the GCC 6 compiler toolchain (instead of clang) for full OpenMP support. On Mac
OS, make sure that your MacPorts ports are up to date, and then run the
following commands:
$ sudo port install openmpi-gcc6
$ sudo port select --set gcc mp-gcc6
$ sudo port select --set mpi openmpi-gcc6-fortran
Details
-------
- Source code for modules is checked out into `~/src`.
- For packages that support building out-of-srcdir, the build directory is
in `/usr1/$USER/build`, `/local/$USER/build`,
`/localscratch/$USER/build` or `/var/tmp/$USER/build`, to
accommodate scratch storage locations on LSC data analysis clusters.
- Packages are installed into `~/local`.
- You will be reminded whenever you are inside the JHBuild environment shell
by the colorized prompt beginning with the text `JHBuild:`.