https://github.com/luizirber/2014-hll-counter

https://github.com/luizirber/2014-hll-counter

Last synced: 7 months ago
JSON representation

• Host: GitHub
• URL: https://github.com/luizirber/2014-hll-counter
• Owner: luizirber
• Created: 2014-05-12T19:59:52.000Z (over 11 years ago)
• Default Branch: master
• Last Pushed: 2015-12-01T18:53:00.000Z (almost 10 years ago)
• Last Synced: 2025-03-15T14:56:43.879Z (7 months ago)
• Language: Python
• Size: 3.16 MB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

Awesome Lists containing this project

README

          
# Efficient cardinality estimation for k-mers in large DNA sequencing data sets

[![Binder](http://mybinder.org/badge.svg)](http://mybinder.org/repo/luizirber/2014-hll-counter)

## Notebooks

  - [HyperLogLog](notebooks/HyperLogLog.ipynb):

  	Initial exploration: is khmer default hash function good for HLL? (No.)

  - [Performance](notebooks/Performance.ipynb):

    Extending the initial HLL implementation with OpenMP (CSE891 class)

  - [Figures](notebooks/Figures.ipynb):

  	Figures and analysis for the paper.