https://github.com/luizirber/2020-09-06-jct

https://github.com/luizirber/2020-09-06-jct

sourmash

Last synced: 3 months ago
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• Host: GitHub
• URL: https://github.com/luizirber/2020-09-06-jct
• Owner: luizirber
• Created: 2020-09-06T14:19:07.000Z (about 5 years ago)
• Default Branch: latest
• Last Pushed: 2020-09-06T17:56:50.000Z (about 5 years ago)
• Last Synced: 2025-07-21T16:22:29.340Z (3 months ago)
• Topics: sourmash
• Language: Jupyter Notebook
• Homepage:
• Size: 3.91 KB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

          
# JCT

[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/luizirber/2020-09-06-jct/latest?urlpath=lab/tree/index.ipynb)

## Setup

All processing and analysis scripts were performed using the conda environment specified in `environment.yml`.

To build and activate this environment run:

```bash

conda env create --force --file environment.yml

conda activate 2020-09-06-jct

```

After installing the conda environment,

you can also use `repo2docker` to create a container with all dependencies,

just like what is executed in `Binder`.

```bash

repo2docker .

```