Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
https://github.com/m-swirski/RiboCrypt
https://github.com/m-swirski/RiboCrypt
Last synced: 2 months ago
JSON representation
- Host: GitHub
- URL: https://github.com/m-swirski/RiboCrypt
- Owner: m-swirski
- License: mit
- Created: 2021-08-25T13:00:02.000Z (about 3 years ago)
- Default Branch: master
- Last Pushed: 2024-03-22T12:28:11.000Z (7 months ago)
- Last Synced: 2024-04-13T02:38:34.611Z (6 months ago)
- Language: R
- Homepage: https://ribocrypt.org
- Size: 4.55 MB
- Stars: 5
- Watchers: 3
- Forks: 2
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
- awesome-riboseq - Code
README
RiboCrypt: R Package for interactive visualization and browsing NGS data.
==============================================================================
#### Online app
See our webpage containing thousands of Ribosome profiling datasets to explore!
[RiboCrypt.org](https://ribocrypt.org/)
#### Installation
We advice you to use github devel version, as this package is under
heavy development, to not lose out on new features!
Package is available from bioconductor (3.16, R version >= 4.0.0)
```r
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("RiboCrypt")
```
Development version on bioconductor (3.17, R version >= 4.0.0)
```r
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("RiboCrypt", version = "devel")
```
Package is also available here on github
```r
if (!requireNamespace("devtools", quietly=TRUE))
install.packages("devtools")
devtools::install_github("m-swirski/RiboCrypt")
```
#### Tutorials
For extensive tutorials, see bioconductor help tutorials (vignettes):
- [Introduction to RiboCrypt](https://bioconductor.org/packages/devel/bioc/vignettes/RiboCrypt/inst/doc/RiboCrypt_overview.html)