https://github.com/maayanlab/genes2networks

Tool for Creating Subnetworks from Lists of Mammalian Genes or Proteins
https://github.com/maayanlab/genes2networks

Last synced: about 1 month ago
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Tool for Creating Subnetworks from Lists of Mammalian Genes or Proteins

• Host: GitHub
• URL: https://github.com/maayanlab/genes2networks
• Owner: MaayanLab
• License: apache-2.0
• Created: 2018-05-16T19:45:35.000Z (almost 7 years ago)
• Default Branch: master
• Last Pushed: 2018-05-16T21:57:32.000Z (almost 7 years ago)
• Last Synced: 2025-01-22T03:15:06.890Z (3 months ago)
• Language: Java
• Size: 26.4 KB
• Stars: 3
• Watchers: 5
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# Genes2Networks

Tool for Creating Subnetworks from Lists of Mammalian Genes or Proteins

[![](https://jitpack.io/v/MaayanLab/Genes2Networks.svg)](https://jitpack.io/#MaayanLab/Genes2Networks)

A software tool that can be used to place lists of mammalian genes in the context of background mammalian signalome and interactome networks. The input to the program is a list of human Entrez Gene gene symbols and background networks in SIG format, while the output includes: (a) all identified interactions for the genes/proteins, (b) a subnetwork connecting the genes/proteins using intermediate components that are used to connect the genes, (c) ranking of the specificity of intermediate components to interact with the list of genes/proteins.

[PMID: 17916244](http://www.ncbi.nlm.nih.gov/sites/entrez?Db=pubmed&Cmd=ShowDetailView&TermToSearch=17916244)