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https://github.com/marcomusy/trackviewer
Browse cell tracks from segmented sample
https://github.com/marcomusy/trackviewer
Last synced: 2 months ago
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Browse cell tracks from segmented sample
- Host: GitHub
- URL: https://github.com/marcomusy/trackviewer
- Owner: marcomusy
- Created: 2022-05-25T19:56:09.000Z (over 2 years ago)
- Default Branch: main
- Last Pushed: 2024-03-05T17:26:43.000Z (10 months ago)
- Last Synced: 2024-05-01T17:24:10.389Z (8 months ago)
- Language: Python
- Size: 91.8 KB
- Stars: 4
- Watchers: 3
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
Awesome Lists containing this project
README
# Track Viewer
Browse interactively cell tracks from segmented samples
## To install
```bash
pip install rich
pip install -U git+https://github.com/marcomusy/vedo.git
git clone https://github.com/marcomusy/trackviewer.git
```
## To run
```bash
cd trackviewer
python main.py
```
## Mouse and Keyboard controls
While in the application press:
```
- arrows to navigate
left/right to change frame
up / down to change track
- drag mouse to rotate the scene in the left panel
- right-click and drag to zoom in and out
- click in right panel to show closest tracks
- 1-9 (on keypad) or + to change volume channel
- l to show track line
- c to show closest ids
- x to jump to the closest track
- t to manually input a track id
- J to join the current track to a specified one
- S to split the current track in half
- W to write the edited track to disk
- o to enable/disable drawing a reference spline
- O to find tracks in the (anti-clock-wise) spline
- p to print current mouse coordinates (in pixels)
- r to reset camera
- q to quit
```