https://github.com/marschall-lab/gaftools

General purpose utility related to GAF files
https://github.com/marschall-lab/gaftools

Last synced: 28 days ago
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General purpose utility related to GAF files

• Host: GitHub
• URL: https://github.com/marschall-lab/gaftools
• Owner: marschall-lab
• License: mit
• Created: 2022-11-17T14:03:39.000Z (about 2 years ago)
• Default Branch: main
• Last Pushed: 2024-05-22T12:13:36.000Z (7 months ago)
• Last Synced: 2024-05-22T13:35:04.978Z (7 months ago)
• Language: Python
• Size: 2.77 MB
• Stars: 7
• Watchers: 2
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

• awesome-pangenomes - gaftools

README

        
# gaftools

gaftools is a fast and comprehensive toolkit designed for processing pangenome alignments. It provides various functionalities such as indexing, sorting, realignment, viewing and statistical analysis of rGFA-based GAF files.

Detailed documentation is available [here](https://gaftools.readthedocs.io/en/latest/index.html).