https://github.com/mayer79/covid

Analyses on COVID-19
https://github.com/mayer79/covid

Last synced: 15 days ago
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Analyses on COVID-19

• Host: GitHub
• URL: https://github.com/mayer79/covid
• Owner: mayer79
• Created: 2020-06-27T13:49:48.000Z (over 4 years ago)
• Default Branch: master
• Last Pushed: 2021-01-26T06:52:28.000Z (almost 4 years ago)
• Last Synced: 2024-10-04T12:57:07.129Z (3 months ago)
• Language: Jupyter Notebook
• Size: 1.35 MB
• Stars: 3
• Watchers: 4
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# COVID-19 Cases per Mio

The short scripts `r/cases_per_mio.R` and `py/cases_per_mio.ipynb`

1. download data from [European Centre for Disease Prevention and Control](https://www.ecdc.europa.eu/en),

2. select a couple of countries and do the necessary transformations, and

3. plots the cases per mio inhabitants including a scatter plot smoother.

The resulting plot of the Python script as per July 31, 2020:

![Some curves](cases_per_mio.png)

(note that the data structure of the required data has been changed from daily to weekly numbers. You will need to adapt the codes accordingly.)

# Weekly COVID-19 deaths per Mio

The short scripts `r/deaths_per_mio.R` and `py/deaths_per_mio.ipynb` are a version of above script, with focus on the more reliable numbers on death counts.

The resulting plot of the Python script is per January 15, 2021.

![Some curves](deaths_per_mio.png)

# COVID-19 number of positive and negative tests in Switzerland

The script `r/tests_switzerland.R` downloads data from the Federal Office of Public Health BAG and visualizes the number of positive and negative cases over time, aggregated per week.

![Tests](tests_Switzerland.png)