https://github.com/mcellteam/cellblender_models

Repository for CellBlender Models and Examples
https://github.com/mcellteam/cellblender_models

cellblender cellblender-model simulation

Last synced: 9 months ago
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Repository for CellBlender Models and Examples

• Host: GitHub
• URL: https://github.com/mcellteam/cellblender_models
• Owner: mcellteam
• Created: 2016-06-09T00:33:51.000Z (about 10 years ago)
• Default Branch: master
• Last Pushed: 2020-02-14T03:26:53.000Z (over 6 years ago)
• Last Synced: 2025-06-20T14:44:38.468Z (12 months ago)
• Topics: cellblender, cellblender-model, simulation
• Language: Python
• Size: 6.41 MB
• Stars: 0
• Watchers: 6
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

          
# CellBlender_Models

## Repository for CellBlender Models and Examples

This repository contains JSON text files (and some scripts) which encapsulate complete CellBlender models.

Models are either grouped into their own subdirectory or added to the "Assorted Models" subdirectory.

These are the current model categories:

* **[Assorted Models](Assorted)**

* **[Fick's Law Models](Ficks_Law)**

* **[Lotka Volterra Models](Lotka_Volterra)**

* **[Synaptic Models](Synaptic)**

To run these models:

* Download and save the JSON text file on local storage.

* Initialize CellBlender (as needed).

* File / Import / CellBlender Model and Geometry (JSON)

* Save as a new Blender file (.blend) where simulation will run.

* Export and Run.

* Reload Visualization Data.

* Zoom with scroll wheel as needed to see model.

* Use "VCR Controls" to play back simulation.

* Explore, modify, and rerun as desired.