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https://github.com/mdanalysis/griddataformats

GridDataFormats is a pure Python library to handle data on a regular grid using commonly used file formats in molecular simulations.
https://github.com/mdanalysis/griddataformats

python

Last synced: about 1 year ago
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GridDataFormats is a pure Python library to handle data on a regular grid using commonly used file formats in molecular simulations.

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README

          

============================
README for GridDataFormats
============================

|build| |cov| |docs| |zenodo| |conda|

The **GridDataFormats** package provides classes to unify reading and
writing n-dimensional datasets. One can read grid data from files,
make them available as a `Grid`_ object, and write out the data again.

Availability
------------

The package is licensed under the LGPL, v3 (see files COPYING_ and
`COPYING.LESSER`_) and is available

* from the Python Package Index under the name `GridDataFormats`_
* as a conda package from the *conda-forge* channel, `conda-forge/griddataformats`_
* in source from the GitHub repository https://github.com/MDAnalysis/GridDataFormats

.. _GridDataFormats:
https://pypi.python.org/pypi/GridDataFormats
.. _`conda-forge/griddataformats`:
https://anaconda.org/conda-forge/griddataformats
.. _COPYING:
https://raw.githubusercontent.com/MDAnalysis/GridDataFormats/master/COPYING
.. _`COPYING.LESSER`:
https://raw.githubusercontent.com/MDAnalysis/GridDataFormats/master/COPYING.LESSER
.. _Grid:
https://www.mdanalysis.org/GridDataFormats/gridData/core.html#gridData.core.Grid

Installation
------------

Installing GridDataFormats with ``pip``
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Install with `pip`_::

pip install gridDataFormats

.. _pip: https://pip.pypa.io/

Installing GridDataFormats with ``conda``
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Installing *GridDataFormats* from the *conda-forge* channel can be
achieved by adding "conda-forge" to your channels with::

conda config --add channels conda-forge

Once the *conda-forge* channel has been enabled, *GridDataFormats* can
be installed with::

conda install griddataformats

Documentation
-------------

For the latest docs see the `GridDataFormats docs`_. (Multiple
versions of the docs are also available at
`griddataformats.readthedocs.org`_.)

.. _GridDataFormats docs:
https://www.mdanalysis.org/GridDataFormats
.. _`griddataformats.readthedocs.org`:
https://griddataformats.readthedocs.org

Contributing
------------

Please use the `issue tracker`_ for bugs and questions.

**GridDataFormats** is open source and contributions are
welcome. Please fork the repository and submit a `pull request`_.

.. _issue tracker:
https://github.com/MDAnalysis/GridDataFormats/issues
.. _pull request:
https://github.com/MDAnalysis/GridDataFormats/pulls

.. |numfocus| image:: https://img.shields.io/badge/powered%20by-NumFOCUS-orange.svg?style=flat&colorA=E1523D&colorB=007D8A
:alt: Powered by NumFOCUS
:target: https://www.numfocus.org/

.. |build| image:: https://github.com/MDAnalysis/GridDataFormats/actions/workflows/gh-ci.yaml/badge.svg
:alt: Github Actions Build Status
:target: https://github.com/MDAnalysis/GridDataFormats/actions/workflows/gh-ci.yaml

.. |cov| image:: https://codecov.io/gh/MDAnalysis/GridDataFormats/branch/master/graph/badge.svg
:alt: Coverage Status
:target: https://codecov.io/gh/MDAnalysis/GridDataFormats

.. |docs| image:: https://img.shields.io/badge/docs-latest-brightgreen.svg
:alt: Documentation
:target: https://www.mdanalysis.org/GridDataFormats/

.. |zenodo| image:: https://zenodo.org/badge/13219/MDAnalysis/GridDataFormats.svg
:alt: Zenodo DOI
:target: https://zenodo.org/badge/latestdoi/13219/MDAnalysis/GridDataFormats

.. |conda| image:: https://anaconda.org/conda-forge/griddataformats/badges/version.svg
:alt: Anaconda
:target: https://anaconda.org/conda-forge/griddataformats