https://github.com/mikelove/tximportdata

THIS REPO IS NOT CURRENT, USE BIOC
https://github.com/mikelove/tximportdata

Last synced: 24 days ago
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THIS REPO IS NOT CURRENT, USE BIOC

• Host: GitHub
• URL: https://github.com/mikelove/tximportdata
• Owner: mikelove
• Created: 2015-11-18T13:13:25.000Z (almost 9 years ago)
• Default Branch: master
• Last Pushed: 2018-10-23T12:52:14.000Z (about 6 years ago)
• Last Synced: 2024-05-09T07:53:17.656Z (6 months ago)
• Homepage: https://bioconductor.org/packages/tximportData
• Size: 24.2 MB
• Stars: 1
• Watchers: 2
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: README.md

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README

        
# THIS REPO IS NOT CURRENT, USE BIOC

# tximportData

This packages provides output files from common transcript estimation

software (Salmon, Kallisto, RSEM, Cufflinks) for demonstration of

import using [tximport](http://github.com/mikelove/tximport).

The files are a subset of 6 samples from the

GEUVADIS project. The citation for the GEUVADIS project is:

Lappalainen et al, "Transcriptome and genome sequencing uncovers functional variation in

humans", *Nature*, 2013.

http://www.nature.com/nature/journal/v501/n7468/full/nature12531.html?WT.ec_id=NATURE-20130926

```

list.files(system.file("extdata",package="tximportData"))

```