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https://github.com/mkoeppe/lrslib

Reverse search algorithm for vertex enumeration/convex hull problems by David Avis (http://cgm.cs.mcgill.ca/~avis/C/lrs.html). Git history on branch "upstream" created from release archives. Branch "autoconfiscation" adds autotools build system by Matthias Köppe.
https://github.com/mkoeppe/lrslib

Last synced: 23 days ago
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Host: GitHub
URL: https://github.com/mkoeppe/lrslib
Owner: mkoeppe
License: gpl-2.0
Created: 2015-06-15T23:27:21.000Z (over 9 years ago)
Default Branch: autoconfiscation
Last Pushed: 2021-07-14T00:47:57.000Z (over 3 years ago)
Last Synced: 2024-03-19T17:33:23.322Z (8 months ago)
Language: Roff
Homepage:
Size: 1010 KB
Stars: 13
Watchers: 6
Forks: 2
Open Issues: 1
Metadata Files:
- Readme: readme
- License: COPYING

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README

README file for lrslib : reverse search vertex enumeration program/CH package
-----------------------------------------------------------------------------
Documentation is currently being maintained at the URL:

http://cgm.cs.mcgill.ca/~avis/C/lrs.html

*** This unofficial version of lrslib, available at
https://github.com/mkoeppe/lrslib/tree/autoconfiscation, has a new
build system using the GNU autotools. It can build shared
libraries on Mac OS X.

-----------------------------------------------------------------------------

Version 7.1b
manual: http://cgm.cs.mcgill.ca/~avis/C/lrslib/USERGUIDE71.html

2021.6.02
Added patches 1,2, and 4 supplied by the Julia group:
https://github.com/JuliaPackaging/Yggdrasil/tree/master/L/lrslib/bundled/patches

no128bit.patch removes 128-bit support and was not used.

2021.6.01 makefile updates

install lrsrestart.h in install-common (thanks to Philipp-Joachim Ost for the report).
Update makefile to ease building on 32 bit architectures.

2021.5.19
redund bug reported by Eric Petersen where output can be lost in arithmetic change
Fixed around l. 6367

--------------------------------------------------------------------------------

Version 7.1

2020.10.17

Memory leak in countonly option fixed for mplrs/lrs.

2020.5.25
Version 7.1 is a major revision completing the move to an all C library begun
in 7.0 which was work in progress and has been removed from distribution.

Major changes to lrs:
1. redund function is now performed by lrs via options, but legacy redund maintained
2. extract option to extract columns from the input especially with linearities
3. hvref makes a cross reference list between H and V representations

Major changes to mplrs:
1. Temporary files no longer used for communicating with workers.
2. Parallel version of redund is now available

Thanks to David Bremner and Jerry James for advice, patches and other help!

Details below

2020.5.19

redund binaries are no longer produced and lrs does redund
functioning via the redund option. For a standard redund run (ie all lines checked)
set up a link:
%ln -s lrs redund and if needed %ln -s lrs1 redund1 etc. for single arithmetic
Now no options are needed and

% redund filename

will remove all redundant inequalities

In mplrs this can be achieved by:

% mpirun -np mplrs -redund filename

2020.4.27

Changes in mplrs relative to 7.0:
1. All C++ code removed or rewritten in C; C++ compiler no longer required.
2. mplrs uses the new lrslib API (2019.11.8) instead of temporary files for
parallel jobs.
3. Support for parallel redund runs using the redund option in input files.
4. Compiler warnings removed.
5. Additional warning and informational messages printed when relevant.
6. New option -redund, for redund runs without adding option to file.
7. Avoid duplicate output lines that were possible on an overflow in
hybrid mode.
8. Fix a rare bug that could omit output lines at the start of a run.

2020.2.5
The extract option is a preprocessing step to remove linearities (if any) and resize
the A matrix using standard lrs processing, which is output as a valid lrs input file.
The resulting file will not contain any equations but may not be full dimensional.
Options in the input file are stripped.
User can specify the cols to retain (where this possible by linear independence).
If there are no linearities in the input file the columns in the option are retained
and the other ones are deleted. This is useful for projecting a V-representation.

extract 0

retains columns in order 1,2,...,n

extract k i1 .. ik

retains columns in order i1,...,ik then the missing 1..n as necessary
Column 0 is always retained.

Use redund to remove redundancies from the output as necessary.
A full lrs run is not performed, however output can be piped:

% lrs file | redund | lrs

2019.12.30

hvref makes a cross reference list between H and V reps
Usage (same for ext file):

Add printcobasis and incidence options to cube.ine

% lrs cube.ine cube.ext
% xref cube.ext

Edit the output file cube.ext.x so that the second line contains two integers

rows maxindex

where rows >= # output lines in cube.ext.x
maxindex >= # input lines in cube.ine

or just use 0 0 and the program will tell you which values to use

% hvref cube.ext.x

2019.11.8

New redund option causes lrs to perform redund function:

redund start end

limits redundancy checking to input rows numbered start,...,end.
Defaults start=1 and end=m is legacy redund and can be obtained by

redund 0 0

lrs_main has been rewritten as lrsv2_main to avoid temporary files in mplrs.
It now passes pointers to P and Q back to mplrs and is called 3 times
according to the stage flag.

stage=0 performs problem setup and reads the input file
stage=1 performs reverse search or redund function
stage=2 performs clean up and closes files

2019.6.13

If lrs is compiled with -DLRS_QUIET lrs produces an ouput file with only the data
between the begin and end lines, ie. a matrix of the V or H representation.
The only exception is if the input is a V-rep and output has linearities
in which case line one has the linearity information

--------------------------------------------------------------------------------------
2019.1.5
Various pivot rules are implemented for solving LPs using variations of the lponly option.
To get pivot counts correct it is best to use lrsgmp at least for now

lponly default, currently Dantzig's rule
lponly_b Bland's rule, which is used for vertex enumeration
lponly_d Dantzig's rule, the only rule used up to Version 7.1
lponly_r random edge rule
lponly_rd alernates random edege and Dantzig

-----------------------------------------------------------------------------

2018.7.1
Version 7.0 (lrslib-070)

User's guide: http://cgm.cs.mcgill.ca/~avis/C/lrslib/USERGUIDE70.html

Recommended makes:
%make # lrs,redund(hybrid arithmetic), lrsgmp, redundgmp
%make mplrs # mplrs(hybrid arithmetic), mplrsgmp

1. hybrid (64bit/128bit/GMP) arithmetic implemented:
speedups of roughly 3-5 times (64bit) and 2 times(128bit) over GMP for problems using small integers.
2. overflow checking for 64/128 bit arithmetic
3. __int128 (gcc v.4.6.0 or later) and FLINT arithmetic now supported
4. lrsgmp, mplrsgmp uses only GMP arithmetic, same as lrslib-062
5. lrs/redund/mplrs start in 64 bit moving to 128 bit and then to gmp arithmetic as necessary
6. single arithmetic versions of lrs/mplrs available for comparison purposes
7. single arithmetic versions of lrsnash are available with overflow checking
8. plrs is no longer supported
9. removing the -DSAFE option disables overflow checking in 64/128 bit mode and results are unpredicable if overflow occurs
10. mplrs now prints maximum tree depth at end and supports printcobasis option in input files

Shared library:

To make just the shared library, and appropriate symlinks,

% make liblrs.o

This is a *multiarithmatic* library that contains the lrslib API
suffixed with _1, _2, and _gmp. To use as a replacement for the old liblrsgmp.so, use

CFLAGS+= "-DGMP -DMA"

The -DMA is new, and enables rewriting of your existing function call
lrs_foo(...) to lrs_foo_gmp(...). This is C preprocessor macros, and
is optional, you can also call the _1, _2, and _gmp versions
directly.

-----------------------------------------------------------------------------
2016.5.27

Several changes to mplrs:
1. New command-line options -countonly, -stopafter , -maxbuf .
2. Volume output.
3. Counting statistics on number of jobs, size of L, number of times
empty changed to longs.
4. Performance improvements for problems with large outputs.

-----------------------------------------------------------------------------
2016.3.28

Changed default to 64-bit arithmetic when using lrslong and lrsmp arithmetic.
For 32bit machines a -DB32 compile flag is now required for make allmp and
for compiles of lrs1/mplrs1/plrs1.

-----------------------------------------------------------------------------
2016.1.18

countonly option follows the end line and suppresses output of vertices/rays/facets

2015.11.20 Current version is lrslib-061 Version 6.1

1. Contains lrsnash.c and lrsnashlib.c replacing nash.c with a library version and simpler interface
that does not require setupnash. Big thanks to Terje Lensberg for this.
nashdemo.c is a very basic template for setting up games and calling the library function lrs_solve_nash(game *g).

To compile:

% make lrsnash

you get binaries lrsnash and nashdemo.

% nashdemo just runs the demo, no parameters

% lrsnash game finds the equlibrium for game, which is in setupnash format (recommended!)

% lrsnash game1 game2 finds the equilibrium for the same game in legacy nash format

The usersguide will be updated in due course

2. mplrs, plrs, lrs had some memory leaks and a few other issues that are fixed in this release (hopefully and thankfully)

--------------------------------------------------------------------------------

2015.10.10
memory leak in nash fixed
2015.10.3
OpenMPI has memory leaks in version 1.8.6. We tested mplrs with version 1.10.0
and found no leaks.
2015.9.16
Bug in nash caused by duplicated rows and columns fixed
2015.9.14
Fixed some lrs memory leaks caused by nonnegative and linearity output

2015.7.13
This a major revision of lrslib which contains mplrs.c, the MPI parallel version of lrs written by Skip Jordan and derived from plrs which was written by Gary Roumanis.
Tests of mplrs on Tsubame2 with up to 1200 cores by Kazuki Yoshizoe show near linear speedups. lrs has some new options which are primarily for use by mplrs.

To install mplrs see: http://cgm.cs.mcgill.ca/~avis/C/lrslib/USERGUIDE.html#mplrs

You will need an MPI library and mpic++ installed.
If you feel lucky try:

% make mplrs

Defalut usage:

% mpirun -np p mplrs [ ]

where p>3 is the number of core to be used.

If you use openmpi the hosts available and slots on each host may be in
/usr/local/etc/openmpi-default-hostfile

Other options available are described in http://cgm.cs.mcgill.ca/~avis/C/lrslib/USERGUIDE.html#mplrs

In particular plots can be made during the mplrs run of the job queue length, number of processors active etc.

The makefile was modified by David Bremner. Please direct any complaints to [email protected]

New option:
maxcobases n
After maxbases have been generated the cobases of the unexplored subtrees are reported.
Each of these can be restarted as a separate lrs run with suitable mindepth option set

------------------------------------------------------------------------------
Older versions

2014.12.4

With gcc 4.8 plrs does not compile. Changed memory ordering (plrs.cpp line 168) from
plrs_output* consume_list = output_list.exchange(0,boost::memory_order_consume);
to
plrs_output* consume_list = output_list.exchange(0,boost::memory_order_acquire);

For more details see here:
https://bitsharestalk.org/index.php?topic=15.msg14109#msg14109

To get plrsmp to compile I converted the length macro to a function call (conflict with str1.length in lrslib.c line 2792)

2014.12.2

From version 1.56.0 the boost library contains the Atomic library, so boost_atomic is no longer included in the lrs distribution.
The instructions below for installing plrs are now simpler.
-----------------------------------------------------------------------------

2014.9.27

lrslib-050 released

lrslib-050 contains a multi-thread version of lrs called plrs. The input/output files for plrs are the
same as for lrs, however plrs is intended just for vertex or facet enumeration, and other functionality
of lrs is not available.

Usage is

% plrs [ ] [ -mt ] [ -id ]

-mt specifies the number parallel threads calling lrs (default 12)
-id specifies the initial depth of the RS tree to generate before parallelization (default 5)

Setup instructions for plrs. Use version 1.57.0 or later of the boost libary

1. Install boost library from http://www.boost.org/ into prefix/boost157

If you have root permission, prefix=/usr/include (or just do not specify it)
However you can install boost locally wherever you like.

Instructions for installing the library are located here
http://www.boost.org/doc/libs/1_57_0/more/getting_started/unix-variants.html.
Look at section 5 for an easy install.
***Important: make a note of the path given at the end of the install process ****

2. Update the makefile to include the paths you recorded in step 1.
"make plrs" will make plrs with the gmp library (assuming the gmp library is already installed on that machine).
"make plrsmp" will make plrs with the standard lrsmp arithmetic library and plrs1 with the long integer library.

-------------------------------------------------------------------------------
2013.5.22 modification to printcobasis so that the objective value is printed
------------------------------------------------------------------------------
2012.9.27 initial release of multithread version of lrs called plrs that uses a wrapper
written by Gary Roumanis. It needs the Boost libraries at http://www.boost.org

plrs setup instructions are in the file readme_plrs
I regret that I cannot give any additional support for the correct installation of boost libraries.

Note: makefile has now changed so that
make all gives gmp arithmetic library
make allmp uses native mp arithmetic if gmp not available
-----------------------------------------------------------------------------
2010.5.7 incidence no longer resets printcobasis frequency to zero.
If the printcobasis n option is used, the frequency will be n.
Otherwise the default n=0 is used, and cobasis is printed only for lexmin bases.
-----------------------------------------------------------------------------

2010.4.26 bug when incidence and nonnegative options used together reported by
Jochen Koenemannkfix was fixed.
Bug in fourier reported by Laszlo David for input which is not full
dimensional. I am temporarily removing fourier from distribution.
-----------------------------------------------------------------------------
2009.12.2 bug fix for redund caused problems in nash, reported by James Heather.
Hopefully this new version solves both issues.
-----------------------------------------------------------------------------
2009.9.10 bug in redund reported by Alden Walker, when linearities are redundant, has been fixed.
It is now under test, so please report any bugs!
this bug also can cause printcobasis option to be incorrect for lrs under this condition.
Problems still seem to arise in fourier from time to time, so please report any anomalities.
-----------------------------------------------------------------------------
2009.2.5 bug in fourier when using linearity option pointed out by Conor Meagher. Option disabled.
2nash driver uses two processors to run nash with input files in both orders.
terminates when first process terminates. Thanks again to Conor for this.
-----------------------------------------------------------------------------
2007.6.6 printcobasis output line modified to give also in_det
det= the determinant of the current basis, which is always integer.
in_det= the determinant of the input rows corresponding to the current basis. lrs rescales input rows if they are rational or have a common divisor, so in these cases det and in_det are different.
For V-representation, the volume will be the sum of the in_det of
each basis, divided by the dimension (n-1)!
-------------------------------------------------------------------
2006.10.31 Modified code for restartpivots, to allow DB to do something.
Estimator now provides estimate of running time=time*bases/tree nodes
Triangulation printed if getvolume and verbose options used
-----------------------------------------------------------------------------

2006.10.11 Bug fix for nash, and inclusion of polytope version
-----------------------------------------------------------------------------

available by using setupnash2
-----------------------------------------------------------------------------
2006.3.1 incidence option now can be used compatibly with printcobasis n
-----------------------------------------------------------------------------
2006.2.14
Version 4.2b

Bug fixed related to memory allocation for linearity reported by David Haws.
If you use the linearity option, you should upgrade to this version.

In the case of inconsistent linearities, the first inconsistent linearity
is now reported before termination.

----------------------------------------------------------------------------
2005.11.20
Version 4.2a

Bug fixed relating to miscaled lp dual variables output when lponly set

maxoutput n Option limits output lines to n: either rays+vertices, or facets

----------------------------------------------------------------------------

2005.6.1
Version 4.2 with two new drivers:

nash.c which computes all Nash equilibria of a two person non-cooperative game,
and uses setupnash.c to create the input files.

fourier.c which does Fourier elimination on an H-representation to project it to
a lower dimensional space. Contributed by Tallman Nkgau.

Other changes: lrs with the lponly option now provides dual variables for the
optimum solution.

Bug fix to mpdouble (reported by several users.)

_____________________________________________________________________________

2004.9.23
Version 4.2 updated with a patch from Bremner that has something to do with C++.

2003.10.24

Version 4.2 which appears here is a prerelease version, is not fully tested,
and will be modified frequently. However you are more than welcome to try
it - please report any bugs! Merci beaucoup.

2002.10.28

lrslib v.4.2 minor modifications to v.4.1

This is a pre-release for test purposes. Please report bugs!
Nonnegative option was fixed to allow input where origin is not necessarily
a vertex.
A memory leak was fixed.
A quiet mode is added - compile with LRS_QUIET set.

------------------------------------------------------------------------------
2001.6.20

lrslib v.4.1

lpsolve like procedures to build input data added. Demo programs are:

vedemo.c vertex enumeration
chdemo.c facet enumeration
lpdemo.c linear programs

They can be build using: make demo

Proper garbage collection implemented to clean up after each problem has been
solved. See

http://cgm.cs.mcgill.ca/~avis/C/lrslib/lrslib.html

for documentation.

-------------------------------------------------------------------------------
2000.6.14

Various binaries are available in the directory binaries.

Currently available:

binaries/debian Debian Linux
binaries/sun Sun Ultra Sparc
binaries/win98 Windows 95/98

------------------------------------------------------------------------------
2000.6.14

lrslib v.4.0 which
supercedes all previous versions of the programs lrs and redund.
New Features:
------------

1. Library version allows customization of the search function, access to the
output as it is produced, and access to lrs from other programs.

2. Problems need no longer be in full dimension. This allows the
input of equations, partial enumeration on facets, ridges etc.

3. Choice of arithmetic packages. Currently available are:

lrsmp Extended precision arithmetic used in previous releases

lrslong Fixed length long integer arithmetic. No overflow checking
but 5-10 times faster.

lrsgmp Requires preinstallation of GNU GMP package, available at
http://www.swox.com/gmp/

The standard "make all" gives lrs/redund with lrsmp, and lrs1/redund1 with lrslong.

4. redund was completely rewritten and is faster than before. The previous
version did not remove redundancy in the starting basis and should be
discarded.

Installation:
------------

1. From website go to "Download" and retrieve the file lrslib-040.tar.gz

2. Unpack with:

% gunzip lrslib-040.tar.gz
% tar xvf lrslib-040.tar

3. Go to the new directory

% cd lrslib-040

4. make binaries by typing

% make all (most 32 bit unix machines)

% make all64 (64 bit integer machines such as DEC Alpha)

If the make fails, it is usually due to timing and/or interrupt handling
routines. In this case try:

% make nosigs

5. If successful you should get binaries: lrs redund lrs1 redund1

6. Test the program lrs by typing:

lrs cube.ine

and you should get output resembling the file cube.ext

7. You will find additional test files in the directories: ine and ext

8. For GNU gmp library, edit the makefile to set the INCLUDE and LIB paths for
the location of the gmp libarary, and type:

%make gmp

You should get binaries glrs and gredund