https://github.com/mlin/pfda2dockstore

Export precisionFDA apps to Dockstore
https://github.com/mlin/pfda2dockstore

Last synced: about 1 year ago
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Export precisionFDA apps to Dockstore

• Host: GitHub
• URL: https://github.com/mlin/pfda2dockstore
• Owner: mlin
• Created: 2016-12-16T22:46:35.000Z (over 9 years ago)
• Default Branch: master
• Last Pushed: 2017-04-26T21:20:55.000Z (about 9 years ago)
• Last Synced: 2025-04-03T10:37:48.635Z (about 1 year ago)
• Language: Python
• Size: 9.77 KB
• Stars: 1
• Watchers: 1
• Forks: 5
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

          
# pfda2dockstore

Export precisionFDA apps to Dockstore

## GitHub Repo Creation

This script (`createrepo.py`) takes your Github token and an organization name and creates a repository in it with a given CWL and Dockerfile.  I had to use two libraries here because PyGithub has a bug when creating a release.

    pip install PyGithub agithub

    python createrepo.py --token $GITHUB_TOKEN --org pfda2dockstore --tool test5 --tag 1.0.0

This will create a test5 repo in Github under the pfda2dockstore organization.

## TODO

* working through tagging, I need to merge with Mike's script

## Quay.io Repo Creation

Actions:

  * Given a Quay token, and Github token, and github repo:

     * Initialize a quay repo with the same name from a Dockerfile in the github repo

     * Setup auto build on any new tag or branch update

## Dockstore Registration

Need to add this code, Ola is working on this.

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Inputs: Github Token, Quay.io token, reponame, list of files