https://github.com/mne-tools/mne-bids

MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
https://github.com/mne-tools/mne-bids

bids eeg electroencephalography ieeg magnetoencephalography meg mne neuroimaging neuroscience

Last synced: 8 months ago
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MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.

• Host: GitHub
• URL: https://github.com/mne-tools/mne-bids
• Owner: mne-tools
• License: bsd-3-clause
• Created: 2017-04-23T20:28:12.000Z (about 9 years ago)
• Default Branch: main
• Last Pushed: 2025-10-20T23:34:35.000Z (8 months ago)
• Last Synced: 2025-10-21T19:49:21.725Z (8 months ago)
• Topics: bids, eeg, electroencephalography, ieeg, magnetoencephalography, meg, mne, neuroimaging, neuroscience
• Language: Python
• Homepage: https://mne.tools/mne-bids/
• Size: 63.7 MB
• Stars: 156
• Watchers: 17
• Forks: 96
• Open Issues: 84
• Metadata Files:
  • Readme: README.md
  • Contributing: CONTRIBUTING.md
  • License: LICENSE
  • Citation: CITATION.cff

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README

          
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MNE-BIDS

========

MNE-BIDS is a Python package that allows you to read and write

[BIDS](https://bids.neuroimaging.io/)-compatible datasets with the help of

[MNE-Python](https://mne.tools/stable/index.html).

![Schematic: From raw data to BIDS using MNE-BIDS](https://mne.tools/mne-bids/assets/MNE-BIDS.png)

Why?

----

MNE-BIDS links BIDS and MNE-Python with the goal to make your analyses faster to code and more robust,

and to facilitate data and code sharing with co-workers and collaborators.

Having your data in BIDS format also allows the use of automated pipelines, for example [mne-bids-pipeline](https://mne.tools/mne-bids-pipeline/stable/).

How?

----

The documentation can be found under the following links:

- for the [stable release](https://mne.tools/mne-bids/)

- for the [latest (development) version](https://mne.tools/mne-bids/dev/index.html)

Getting Help

------------

[](https://mne.discourse.group)

For any usage questions, please post to the [MNE Forum](https://mne.discourse.group).

Be sure to add the `mne-bids` tag to your question.

Citing

------

[![JOSS publication](https://joss.theoj.org/papers/5b9024503f7bea324d5e738a12b0a108/status.svg)](https://joss.theoj.org/papers/5b9024503f7bea324d5e738a12b0a108)

If you use MNE-BIDS in your work, please cite our

[publication in JOSS](https://doi.org/10.21105/joss.01896):

> Appelhoff, S., Sanderson, M., Brooks, T., Vliet, M., Quentin, R., Holdgraf, C.,

Chaumon, M., Mikulan, E., Tavabi, K., Höchenberger, R., Welke, D., Brunner, C.,

Rockhill, A., Larson, E., Gramfort, A., & Jas, M. (2019): **MNE-BIDS: Organizing

electrophysiological data into the BIDS format and facilitating their analysis.**

*Journal of Open Source Software,* 4:1896. DOI: [10.21105/joss.01896](https://doi.org/10.21105/joss.01896)

Please also cite one of the following papers to credit BIDS, depending on which data type you used:

- [MEG-BIDS](https://doi.org/10.1038/sdata.2018.110)

- [EEG-BIDS](https://doi.org/10.1038/s41597-019-0104-8)

- [iEEG-BIDS](https://doi.org/10.1038/s41597-019-0105-7)

- [NIRS-BIDS](https://doi.org/10.31219/osf.io/7nmcp)

- [Motion-BIDS](https://doi.org/10.1038/s41597-024-03559-8)