https://github.com/moloney/dcmstack

DICOM to Nifti conversion with meta data preservation
https://github.com/moloney/dcmstack

Last synced: 23 days ago
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DICOM to Nifti conversion with meta data preservation

• Host: GitHub
• URL: https://github.com/moloney/dcmstack
• Owner: moloney
• License: other
• Created: 2012-01-24T21:29:24.000Z (almost 13 years ago)
• Default Branch: master
• Last Pushed: 2023-10-17T11:25:56.000Z (about 1 year ago)
• Last Synced: 2024-04-25T18:41:41.757Z (8 months ago)
• Language: Python
• Homepage:
• Size: 3.53 MB
• Stars: 72
• Watchers: 7
• Forks: 49
• Open Issues: 20
• Metadata Files:
  • Readme: README.rst
  • License: COPYING

Awesome Lists containing this project

• awesome-dicom - dcmstack - DICOM to NIfTI conversion with the added ability to extract and summarize metadata from the source files. (Libraries / Python)

README

        
========

dcmstack

========

This package provides DICOM to Nifti conversion with the added ability 

to extract and summarize meta data from the source DICOMs. The meta data

can be injected it into a Nifti header extension or written out as a JSON 

formatted text file.

Installing

----------

You can the latest release from PyPI by doing:

.. code-block:: console

  $ pip install dcmstack

Documentation

-------------

Documentation can be read online: https://dcmstack.readthedocs.org/

You can build the HTML documentation under build/sphinx/html with:

If you have the *sphinx* and *numpydoc* packages and a *make* command you 

can build the documentation by running the *make* command in the *doc/* 

directory. For example, to create the HTML documentation you would do:

.. code-block:: console

  

  $ python setup.py build_sphinx

  $ make html

And then view doc/_build/html/index.html with a web browser.

Running Tests

-------------

You can install dcmstack along with any test dependencies by installing the ``test`` 

extra. Then you can run the ``pytest`` command to run the test-suite:

.. code-block:: console

  

  $ pip install dcmstack[test]

  $ pytest