https://github.com/mpusp/snakemake-simple-mapping
A Snakemake workflow for the mapping of reads to reference genomes, minimalistic and simple.
https://github.com/mpusp/snakemake-simple-mapping
bowtie2 bwa-mem2 genomics mapping next-generation-sequencing snakemake snakemake-workflow star-alignment variant-calling
Last synced: 3 months ago
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A Snakemake workflow for the mapping of reads to reference genomes, minimalistic and simple.
- Host: GitHub
- URL: https://github.com/mpusp/snakemake-simple-mapping
- Owner: MPUSP
- License: mit
- Created: 2025-06-16T14:20:29.000Z (12 months ago)
- Default Branch: main
- Last Pushed: 2025-12-18T14:04:29.000Z (6 months ago)
- Last Synced: 2025-12-21T18:37:29.485Z (6 months ago)
- Topics: bowtie2, bwa-mem2, genomics, mapping, next-generation-sequencing, snakemake, snakemake-workflow, star-alignment, variant-calling
- Language: Python
- Homepage:
- Size: 2.48 MB
- Stars: 1
- Watchers: 1
- Forks: 1
- Open Issues: 1
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Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
- License: LICENSE