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https://github.com/mrc-ide/gonovax

Last synced: about 2 months ago
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Host: GitHub
URL: https://github.com/mrc-ide/gonovax
Owner: mrc-ide
License: other
Created: 2020-08-03T07:58:42.000Z (over 4 years ago)
Default Branch: master
Last Pushed: 2024-04-11T12:53:52.000Z (9 months ago)
Last Synced: 2024-04-11T14:24:21.609Z (9 months ago)
Language: R
Homepage: https://mrc-ide.github.io/gonovax
Size: 23.6 MB
Stars: 3
Watchers: 1
Forks: 0
Open Issues: 2
Metadata Files:
- Readme: README.md
- License: LICENSE

Awesome Lists containing this project

README

        # gonovax

[![Project Status: Concept – Minimal or no implementation has been done yet, or the repository is only intended to be a limited example, demo, or proof-of-concept.](https://www.repostatus.org/badges/latest/concept.svg)](https://www.repostatus.org/#concept)

[![R build status](https://github.com/mrc-ide/gonovax/workflows/R-CMD-check/badge.svg)](https://github.com/mrc-ide/gonovax/actions)

[![CodeFactor](https://www.codefactor.io/repository/github/mrc-ide/gonovax/badge?s=1d60596994e72a75be157e74ec8e23948e90fc31)](https://www.codefactor.io/repository/github/mrc-ide/gonovax)

[![codecov](https://codecov.io/gh/mrc-ide/gonovax/branch/master/graph/badge.svg?token=9u8S3v45AX)](https://codecov.io/gh/mrc-ide/gonovax)

This package implements a compartmental model of gonorrhoea infection with vaccination.



## Installation

You will need a compiler to install dependencies for the package, and to build

the models. Use `pkgbuild::check_build_tools()` to see if your system is usable.

You will need the packages `odin` and `mcstate`, which can be installed using:

```r

remotes::install_github("mrc-ide/odin", upgrade = FALSE)

remotes::install_github("mrc-ide/mcstate", upgrade = FALSE)

```

The package can then be installed directly from GitHub with:

```r

remotes::install_github("mrc-ide/gonovax", upgrade = FALSE)

```

## License

MIT © Imperial College of Science, Technology and Medicine