https://github.com/msk-access/nucleo_qc
Quality Control Workflow for UMI based BAMs
https://github.com/msk-access/nucleo_qc
cfdna chip
Last synced: 4 months ago
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Quality Control Workflow for UMI based BAMs
- Host: GitHub
- URL: https://github.com/msk-access/nucleo_qc
- Owner: msk-access
- License: apache-2.0
- Created: 2021-06-04T14:54:35.000Z (about 5 years ago)
- Default Branch: main
- Last Pushed: 2026-01-26T23:06:26.000Z (4 months ago)
- Last Synced: 2026-01-27T09:31:31.375Z (4 months ago)
- Topics: cfdna, chip
- Language: Common Workflow Language
- Homepage: https://cmo-ci.gitbook.io/nucleo-quality-control/
- Size: 25.1 MB
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
# Nucleo Quality Control
Workflows that generate, aggregate, and visualize quality control files for the Nucleo pipeline.
* Documentation: [https://cmo-ci.gitbook.io/nucleo-quality-control/](https://cmo-ci.gitbook.io/nucleo-quality-control/)
## Installation
Clone the repository:
```
git clone --depth 50 https://github.com/msk-access/nucleo_qc.git
```
## Credits
* CMO cfDNA Informatics Team
* Cookiecutter: [https://github.com/audreyr/cookiecutter](https://github.com/audreyr/cookiecutter)
* `audreyr/cookiecutter-pypackage`: [https://github.com/audreyr/cookiecutter-pypackage](https://github.com/audreyr/cookiecutter-pypackage)