https://github.com/mskcc/igo-run-qc-node

https://github.com/mskcc/igo-run-qc-node

Last synced: about 1 month ago
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• Host: GitHub
• URL: https://github.com/mskcc/igo-run-qc-node
• Owner: mskcc
• Created: 2022-10-14T14:18:11.000Z (about 2 years ago)
• Default Branch: main
• Last Pushed: 2024-06-03T15:18:12.000Z (7 months ago)
• Last Synced: 2024-06-03T17:48:31.408Z (7 months ago)
• Language: JavaScript
• Size: 1010 KB
• Stars: 0
• Watchers: 5
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# IGO Run QC

Application that displays all post sequencing stats for IGO to make pass/fail/deliver decisions for samples and projects.

## Development Setup

### Frontend

1) Setup

    ```

    cd frontend

    npm install

    npm run start           # application should be started on localhost:3000

    ```  

2) Cookie - Place cookie in session w/ localhost as domain

    - Log into https://igodev.mskcc.org/login/

    - Upon successful authentication, change `Domain` of cookie from `igodev.mskcc.org` to `localhost`. This makes the cookie available in your local application. See image and guide below for more information about changing your cookie. NOTE - If the `.env` `JWT_SECRET` doesn't match that of igo-dev, the cookie will be invalid)

    - Navigate back to `localhost:3000`, which should now have the session cookie to make requests

**In Chrome**: 

DevTools > Application > Storage:Cookies > Select Domain > Modify domain value of cookie w/ `jic` to `localhost`).

![Modify_Cookie](https://developers.google.com/web/tools/chrome-devtools/storage/imgs/clearallcookies.png)

Reference - [View, Edit, And Delete Cookies With Chrome DevTools](https://developers.google.com/web/tools/chrome-devtools/storage/cookies)

### Backend

1) Configurations - Update `.env` file

2) Run

```

cd backend

npm install

npm run start

```