https://github.com/muntashirakon/phpphylogenetictrees

A simple PHP library to build phylogenic trees from distance matrix
https://github.com/muntashirakon/phpphylogenetictrees

distance-matrix nj php-library phylogenetic-trees upgma

Last synced: 30 days ago
JSON representation

A simple PHP library to build phylogenic trees from distance matrix

• Host: GitHub
• URL: https://github.com/muntashirakon/phpphylogenetictrees
• Owner: MuntashirAkon
• License: mit
• Created: 2017-10-22T15:10:27.000Z (about 7 years ago)
• Default Branch: master
• Last Pushed: 2017-10-22T15:10:35.000Z (about 7 years ago)
• Last Synced: 2024-04-14T03:00:14.467Z (9 months ago)
• Topics: distance-matrix, nj, php-library, phylogenetic-trees, upgma
• Language: PHP
• Size: 6.84 KB
• Stars: 0
• Watchers: 3
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: Readme.md
  • License: LICENSE

Awesome Lists containing this project

README

        
# PHPPhylogeneticTrees

A simple PHP library to build phylogenetic trees from distance matrix.

_This library is converted from `Match7`, a small tool written using Java

 by the **Royal Veterinary and Agricultural University, Copenhagen, Denmark**._

### Requirements

PHP 5.4.0 or later

### Installation

Download the repo and include the `autoload.php` to your project files

### Examples

Examples are in the `Examples` directory.

_NOTE: Use only `UPGMATree` and `NJTree` classes if you're not going to use the `TreeGenerator` class._

### License

MIT License