https://github.com/nanoporetech/modkit

A bioinformatics tool for working with modified bases
https://github.com/nanoporetech/modkit

methylation modified-bases nanopore

Last synced: about 1 month ago
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A bioinformatics tool for working with modified bases

• Host: GitHub
• URL: https://github.com/nanoporetech/modkit
• Owner: nanoporetech
• License: other
• Created: 2023-03-03T16:28:51.000Z (about 2 years ago)
• Default Branch: master
• Last Pushed: 2025-03-06T13:59:25.000Z (about 2 months ago)
• Last Synced: 2025-03-29T03:02:05.123Z (about 1 month ago)
• Topics: methylation, modified-bases, nanopore
• Language: Rust
• Homepage: https://nanoporetech.com/
• Size: 198 MB
• Stars: 180
• Watchers: 12
• Forks: 10
• Open Issues: 155
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.md

Awesome Lists containing this project

• awesome-nanopore - modkit - [Rust] - Extract modified base calls from dorado BAM output to bedMethyl format, also calculate DMRs (Software packages / DNA modification analysis)