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https://github.com/nanoporetech/modkit
A bioinformatics tool for working with modified bases
https://github.com/nanoporetech/modkit
methylation modified-bases nanopore
Last synced: 2 months ago
JSON representation
A bioinformatics tool for working with modified bases
- Host: GitHub
- URL: https://github.com/nanoporetech/modkit
- Owner: nanoporetech
- License: other
- Created: 2023-03-03T16:28:51.000Z (almost 2 years ago)
- Default Branch: master
- Last Pushed: 2024-09-17T16:36:18.000Z (4 months ago)
- Last Synced: 2024-09-17T20:49:51.803Z (4 months ago)
- Topics: methylation, modified-bases, nanopore
- Language: Rust
- Homepage: https://nanoporetech.com/
- Size: 196 MB
- Stars: 129
- Watchers: 13
- Forks: 7
- Open Issues: 85
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Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
Awesome Lists containing this project
- awesome-nanopore - modkit - [Rust] - Extract modified base calls from dorado BAM output to bedMethyl format, also calculate DMRs (Software packages / DNA modification analysis)