https://github.com/nanoporetech/vbz_js

JS bindings for VBZ compression
https://github.com/nanoporetech/vbz_js

compression nanopore wasm

Last synced: 3 months ago
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JS bindings for VBZ compression

• Host: GitHub
• URL: https://github.com/nanoporetech/vbz_js
• Owner: nanoporetech
• Created: 2021-11-09T20:04:59.000Z (over 3 years ago)
• Default Branch: master
• Last Pushed: 2023-02-27T17:00:14.000Z (over 2 years ago)
• Last Synced: 2024-05-09T15:34:28.701Z (about 1 year ago)
• Topics: compression, nanopore, wasm
• Language: WebAssembly
• Homepage: https://nanoporetech.com/
• Size: 3.27 MB
• Stars: 0
• Watchers: 18
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# VBZ JS

JS bindings for [VBZ Compression](https://github.com/nanoporetech/vbz_compression).

# Dependencies

EMCC - https://emscripten.org/docs/getting_started/downloads.html

Tip: If installed but EMCC not found in VSCode, download the repo, cd into it and activate the env vars:

```

source ./emsdk_env.sh

```

# Build

```bash

cd streamvbyte

./build.sh

cd ..

npm run build:node

```

Currently the no SIMD version has been dropped. To build:

```

# Remove the line `#include ` from streamvbyte_wasm.c

./build-no-simd.sh

```

# Testing

Run tests via jest

To do: Move all tests from test_script.js to vbz.test.js

```

npm run build:test

npm run test

```