https://github.com/nanxstats/grex

Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
https://github.com/nanxstats/grex

bioinformatics gene-expression genotype-tissue-expression gtex

Last synced: about 2 months ago
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Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data

• Host: GitHub
• URL: https://github.com/nanxstats/grex
• Owner: nanxstats
• License: gpl-3.0
• Created: 2016-06-10T21:56:07.000Z (over 8 years ago)
• Default Branch: master
• Last Pushed: 2021-12-21T04:09:59.000Z (about 3 years ago)
• Last Synced: 2024-11-06T23:12:07.617Z (about 2 months ago)
• Topics: bioinformatics, gene-expression, genotype-tissue-expression, gtex
• Language: R
• Homepage: https://nanx.me/grex/
• Size: 4.28 MB
• Stars: 8
• Watchers: 2
• Forks: 2
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • Contributing: CONTRIBUTING.md
  • License: LICENSE

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README

        
# grex 

[![R-CMD-check](https://github.com/nanxstats/grex/workflows/R-CMD-check/badge.svg)](https://github.com/nanxstats/grex/actions)

[![CRAN Version](https://www.r-pkg.org/badges/version/grex)](https://cran.r-project.org/package=grex)

[![Downloads from the RStudio CRAN mirror](https://cranlogs.r-pkg.org/badges/grex)](https://cranlogs.r-pkg.org/badges/grex)

`grex` offers a minimal dependency solution for mapping Ensembl gene IDs to Entrez IDs, HGNC gene symbols, and UniProt IDs, for Genotype-Tissue Expression (GTEx) data.

## Installation

Install `grex` from CRAN:

```r

install.packages("grex")

```

Or try the development version on GitHub:

```r

remotes::install_github("nanxstats/grex")

```

See `vignette("grex")` for a quick-start guide.

## Contribute

To contribute to this project, please take a look at the [Contributing Guidelines](CONTRIBUTING.md) first. Please note that this project is released with a [Contributor Code of Conduct](CONDUCT.md). By participating in this project you agree to abide by its terms.