Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
https://github.com/natir/variant_myth
https://github.com/natir/variant_myth
Last synced: 3 months ago
JSON representation
- Host: GitHub
- URL: https://github.com/natir/variant_myth
- Owner: natir
- License: mit
- Created: 2024-06-19T16:29:40.000Z (7 months ago)
- Default Branch: main
- Last Pushed: 2024-09-09T15:59:44.000Z (4 months ago)
- Last Synced: 2024-09-09T19:43:21.456Z (4 months ago)
- Language: Rust
- Size: 1.23 MB
- Stars: 1
- Watchers: 1
- Forks: 1
- Open Issues: 1
-
Metadata Files:
- Readme: Readme.md
- Changelog: CHANGELOG.md
- Contributing: CONTRIBUTING.md
- License: LICENSE
- Code of conduct: CODE_OF_CONDUCT.md
Awesome Lists containing this project
README
# Variant Myth 🧬 💻
![tests](https://github.com/natir/variant_myth/workflows/tests/badge.svg)
![lints](https://github.com/natir/variant_myth/workflows/lints/badge.svg)
![msrv](https://github.com/natir/variant_myth/workflows/msrv/badge.svg)
[![website](https://github.com/natir/variant_myth/workflows/website/badge.svg)](https://natir.github.io/variant_myth)
[![dev-doc](https://img.shields.io/badge/dev-doc-blue)](https://natir.github.io/variant_myth/doc/variant_myth/)
[![license](https://img.shields.io/badge/license-MIT-purple)](https://github.com/natir/variant_myth/blob/main/LICENSE)
[![copier](https://img.shields.io/badge/copier-template-yellow)](https://github.com/natir/copier-rust)A fast genomic variant annotator.
## Rationale
Variant annotation take time, too much time, variant_myth try to solve this problem using modern and parallel tools.
To detect if a variant match an interval we use IntervalSet, information associated with intervals are stored in classic Swiss Table with AHash hash function.
- [Install instruction](https://natir.github.io/variant_myth/install.html)
- [Usage instruction](https://natir.github.io/variant_myth/usage.html)## Minimum supported Rust version
Currently the minimum supported Rust version is 1.74.