https://github.com/neelsoumya/survival_models
A repository of code and resources for survival models
https://github.com/neelsoumya/survival_models
cox-models survival-models
Last synced: 3 months ago
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A repository of code and resources for survival models
- Host: GitHub
- URL: https://github.com/neelsoumya/survival_models
- Owner: neelsoumya
- License: gpl-3.0
- Created: 2020-09-03T07:37:02.000Z (over 4 years ago)
- Default Branch: master
- Last Pushed: 2022-07-19T20:04:21.000Z (almost 3 years ago)
- Last Synced: 2025-01-08T08:47:03.437Z (4 months ago)
- Topics: cox-models, survival-models
- Language: HTML
- Homepage:
- Size: 2.2 MB
- Stars: 2
- Watchers: 3
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
This is a repository of examples of plotting survival curves and time to event analysis.
https://en.wikipedia.org/wiki/Survival_analysis
* Fitting a Kaplan-Meier and a Cox proportional hazards model
* `survival_analysis_example.Rmd`
* Fitting survival models advanced inluding advanced options in Cox models, counting options in coxph(), diagnostics for Cox models, time dependent covariates in Cox models, etc
* `survival_advanced.R`
* `expand_nomissing_study1.csv`
* data file for survival data
* Fitting a piecewise exponential proportional hazards model
* `piecewise_exponential_proportional_hazards_model.R`
* Fitting a survival model using a GLM Poisson model
* `simple_glm_survival.R`
* Fitting survival trees
* `survival_trees.R`
* Meta-analysis of survival models and hazard ratios
* `metaanalysis_hazard_ratios.R`
* Cheatsheets and other resources
* cheatsheets
* Adapted from
https://stat.ethz.ch/R-manual/R-devel/library/survival/html/survfit.formula.html
* Adapted from
https://rviews.rstudio.com/2017/09/25/survival-analysis-with-r/
* Adapted from
https://stats.stackexchange.com/questions/348922/piecewise-exponential-model-how-to-fit
* Additional resources
www.stat.columbia.edu/~madigan/W2025/notes/survival.pdf
http://data.princeton.edu/wws509/notes/
https://rpkgs.datanovia.com/survminer/index.html
http://www.sthda.com/english/wiki/survival-analysis-basics
* Contact
* Soumya Banerjee