https://github.com/neves-p/daisietesting

continuous testing platform for the geodynamics development version of the DAISIE package
https://github.com/neves-p/daisietesting

Last synced: 21 days ago
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continuous testing platform for the geodynamics development version of the DAISIE package

• Host: GitHub
• URL: https://github.com/neves-p/daisietesting
• Owner: Neves-P
• License: gpl-3.0
• Created: 2020-02-03T15:25:18.000Z (almost 5 years ago)
• Default Branch: master
• Last Pushed: 2020-10-08T13:04:06.000Z (about 4 years ago)
• Last Synced: 2024-10-27T19:29:04.725Z (2 months ago)
• Language: R
• Homepage:
• Size: 120 KB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • Changelog: NEWS.md
  • License: LICENSE.md

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README

        
# DAISIEtesting

![GitHub release (latest by date including pre-releases)](https://img.shields.io/github/v/release/Neves-P/DAISIEtesting?include_prereleases)

This R package functions as a continuous testing platform for the [DAISIE](https://github.com/rsetienne/DAISIE) package.

Branch|[Travis](https://travis-ci.org)|[AppVeyor](https://www.appveyor.com/)|[Codecov](https://www.codecov.io)

---|---|---|---

`master`|[![Travis build status](https://travis-ci.org/Neves-P/DAISIEtesting.svg?branch=master)](https://travis-ci.org/Neves-P/DAISIEtesting)|[![AppVeyor build status](https://ci.appveyor.com/api/projects/status/github/Neves-P/DAISIEtesting?branch=master&svg=true)](https://ci.appveyor.com/project/Neves-P/DAISIEtesting)|[![codecov](https://codecov.io/gh/Neves-P/DAISIEtesting/branch/master/graph/badge.svg)](https://codecov.io/gh/Neves-P/DAISIEtesting)

## Related links

[DAISIE on GitHub](https://github.com/rsetienne/DAISIE)

[DAISIE on CRAN](https://cran.r-project.org/package=DAISIE)

[DAISIErobustness](https://github.com/Neves-P/DAISIErobustness)

## Support/Questions

Contact [@Neves-P](https://github.com/Neves-P) or [@joshwlambert](https://github.com/joshwlambert).

## References

Etienne R. S., Valente, L., Phillimore, A. B., Haegeman, B., Lambert, J. W., Neves, P., Xie, S., & Bilderbeek, R. J. C. (2020). DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction. R package version 3.0.1. https://cran.r-project.org/package=DAISIE

Valente, L., Etienne, R.S., & Phillimore, A.B. (2014). The effects of island ontogeny on species diversity and phylogeny. Proceedings of the Royal Society B: Biological Sciences, 281(1784), 20133227–20133227. http://doi.org/10.1098/rspb.2013.3227

Valente, L., Phillimore, A.B., & Etienne, R.S. (2015). Equilibrium and non-equilibrium dynamics simultaneously operate in the Galápagos islands. Ecology Letters, 18(8), 844–852. http://doi.org/10.1111/ele.12461

Valente, L., Etienne, R.S., & Dávalos, L.M. (2017). Recent extinctions disturb path to equilibrium diversity in Caribbean bats. Nature Ecology & Evolution, 1(2), 0026. http://doi.org/10.1038/s41559-016-0026

Valente, L., Illera, J.C., Havenstein, K., Pallien, T., Etienne, R.S., & Tiedemann, R. (2017). Equilibrium Bird Species Diversity in Atlantic Islands. Current Biology, 27(11), 1660-1666. https://doi.org/10.1016/j.cub.2017.04.053

Valente, L., Phillimore, A.B., & Etienne, R.S. (2018). Using molecular phylogenies in island biogeography: It’s about time. Ecography, 1–3. http://doi.org/10.1111/ecog.03503

Valente, L., Etienne, R.S., & Garcia-R., J.C. (2019). “Deep Macroevolutionary Impact of Humans on New Zealand’s Unique Avifauna.” Current Biology 29 (15): 2563-2569.e4. https://doi.org/10.1016/j.cub.2019.06.058

Valente, L., Phillimore, A.B., Melo, M., Warren, B.H., Clegg, S.M., Havenstein, K., Tiedemann, R., Illera, J.C.,, Thebaud, C., Aschenbach, T. & Etienne, R.S. (2020). “A Simple Dynamic Model Explains the Diversity of Island Birds Worldwide.” Nature 579 (7797): 92–96. https://doi.org/10.1038/s41586-020-2022-5

Hauffe, T., Delicado, D., Etienne, R.S., & Valente, L. (2020). Lake expansion elevates equilibrium diversity via increasing colonization. Journal of Biogeography 47: 1849–1860. https://doi.org/10.1111/jbi.13914