https://github.com/nicolossus/master-thesis

Master thesis
https://github.com/nicolossus/master-thesis

Last synced: 3 months ago
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Master thesis

• Host: GitHub
• URL: https://github.com/nicolossus/master-thesis
• Owner: nicolossus
• Created: 2020-06-02T11:38:47.000Z (almost 5 years ago)
• Default Branch: master
• Last Pushed: 2021-12-08T03:13:21.000Z (over 3 years ago)
• Last Synced: 2025-01-14T01:34:39.581Z (4 months ago)
• Language: Jupyter Notebook
• Size: 75.9 MB
• Stars: 0
• Watchers: 1
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# Master Thesis

[![Project Status: WIP – Initial development is in progress, but there has not yet been a stable, usable release suitable for the public.](https://www.repostatus.org/badges/latest/wip.svg)](https://www.repostatus.org/#wip)

[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/nicolossus/Master-thesis/HEAD)

[![nbviewer](https://raw.githubusercontent.com/jupyter/design/master/logos/Badges/nbviewer_badge.svg)](https://nbviewer.jupyter.org/github/nicolossus/Master-thesis/tree/master/notebooks/development/)

[![Documentation Status](https://readthedocs.org/projects/pylfi/badge/?version=latest)](https://pylfi.readthedocs.io/en/latest/?badge=latest)

**Initial development is in progress, i.e., things may not work as intended yet.**

Simulation-based inference of parameteres in mechanistic models.

## Structure

The [latex folder](https://github.com/nicolossus/Master-thesis/tree/master/latex) contains the LaTeX source for building the thesis, as well as [figures](https://github.com/nicolossus/Master-thesis/tree/master/latex/figures) and [tables](https://github.com/nicolossus/Master-thesis/tree/master/tables) generated in the analyses.

The [notebooks folder](https://github.com/nicolossus/Master-thesis/tree/master/notebooks) contains Jupyter notebooks used in the analyses. For details, see the [notebooks readme](https://github.com/nicolossus/Master-thesis/blob/master/notebooks/README.md).

The [report folder](https://github.com/nicolossus/Master-thesis/tree/master/report) contains the report rendered to PDF from the LaTeX source.

The [resources folder](https://github.com/nicolossus/Master-thesis/tree/master/resources) contains project resources such as raw data to be analysed.

The [src folder](https://github.com/nicolossus/Master-thesis/tree/master/src) contains the source code. For details, see the [src readme](https://github.com/nicolossus/Master-thesis/blob/master/src/README.md).

The [test folder](https://github.com/nicolossus/Master-thesis/tree/master/test) contains procedures for unit testing and [benchmarking](https://github.com/nicolossus/Master-thesis/tree/master/test/benchmark) the source code developed for the project.