https://github.com/nielsdos/fgs.rs

FragGeneScan port to Rust
https://github.com/nielsdos/fgs.rs

Last synced: 27 days ago
JSON representation

FragGeneScan port to Rust

• Host: GitHub
• URL: https://github.com/nielsdos/fgs.rs
• Owner: nielsdos
• License: gpl-3.0
• Created: 2020-11-11T13:52:01.000Z (about 4 years ago)
• Default Branch: main
• Last Pushed: 2022-08-16T09:06:44.000Z (over 2 years ago)
• Last Synced: 2024-11-08T07:52:55.751Z (3 months ago)
• Language: Rust
• Size: 1.97 MB
• Stars: 0
• Watchers: 2
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

        
# FragGeneScan in Rust

The assignment for Computational Biology was to create a faster, racecondition-free version of [FragGeneScan](https://omics.informatics.indiana.edu/FragGeneScan/) and FragGeneScan+(+).

This repository contains my reimplementation in Rust, which is faster than FGS 1.31.

The output is not identical to FGS 1.31, it's closer to 1.30, which I believe is more correct.

The original FGS is licensed under GPL3, so is this repository.

This repository contains train files from the original FragGeneScan.