https://github.com/nipy/nipy

Neuroimaging in Python FMRI analysis package
https://github.com/nipy/nipy

Last synced: 3 months ago
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Neuroimaging in Python FMRI analysis package

• Host: GitHub
• URL: https://github.com/nipy/nipy
• Owner: nipy
• License: other
• Created: 2010-05-02T10:00:33.000Z (over 14 years ago)
• Default Branch: main
• Last Pushed: 2024-07-25T12:35:52.000Z (4 months ago)
• Last Synced: 2024-07-25T14:13:00.930Z (4 months ago)
• Language: Python
• Homepage: http://nipy.org/nipy
• Size: 41.1 MB
• Stars: 379
• Watchers: 36
• Forks: 144
• Open Issues: 38
• Metadata Files:
  • Readme: README.rst
  • Changelog: Changelog
  • License: LICENSE

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README

        
.. -*- rest -*-

.. vim:syntax=rst

.. image:: https://codecov.io/gh/nipy/nipy/branch/main/graph/badge.svg

   :target: https://app.codecov.io/gh/nipy/nipy/branch/main

====

NIPY

====

Neuroimaging tools for Python.

The aim of NIPY is to produce a platform-independent Python environment for

the analysis of functional brain imaging data using an open development model.

In NIPY we aim to:

1. Provide an open source, mixed language scientific programming environment

   suitable for rapid development.

2. Create software components in this environment to make it easy to develop

   tools for MRI, EEG, PET and other modalities.

3. Create and maintain a wide base of developers to contribute to this

   platform.

4. To maintain and develop this framework as a single, easily installable

   bundle.

NIPY is the work of many people. We list the main authors in the file

``AUTHOR`` in the NIPY distribution, and other contributions in ``THANKS``.

Website

=======

Current information can always be found at the `NIPY project website

`_.

Mailing Lists

=============

For questions on how to use nipy or on making code contributions, please see

the ``neuroimaging`` mailing list:

    https://mail.python.org/mailman/listinfo/neuroimaging

Please report bugs at github issues:

    https://github.com/nipy/nipy/issues

You can see the list of current proposed changes at:

    https://github.com/nipy/nipy/pulls

Code

====

You can find our sources and single-click downloads:

* `Main repository`_ on Github;

* Documentation_ for all releases and current development tree;

* Download the `current development version`_ as a tar/zip file;

* Downloads of all `available releases`_.

.. _main repository: https://github.com/nipy/nipy

.. _Documentation: http://nipy.org/nipy

.. _current development version: https://github.com/nipy/nipy/archive/main.zip

.. _available releases: http://pypi.python.org/pypi/nipy

Tests

=====

To run nipy's tests, you will need to install the pytest_ Python testing

package::

    pip install pytest

Then::

    pytest nipy

You can run the doctests along with the other tests with::

    pip install pytest-doctestplus

Then::

    pytest --doctest-plus nipy

Installation

============

See the latest `installation instructions`_.

License

=======

We use the 3-clause BSD license; the full license is in the file ``LICENSE`` in

the nipy distribution.

.. links:

.. _python: http://python.org

.. _numpy: http://numpy.org

.. _scipy: http://scipy.org

.. _sympy: http://sympy.org

.. _nibabel: http://nipy.org/nibabel

.. _ipython: http://ipython.org

.. _matplotlib: http://matplotlib.org

.. _pytest: http://pytest.org

.. _installation instructions: http://nipy.org/nipy/users/installation.html