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https://github.com/nivasharmaa/genetrack

A Java program for analyzing DNA sequences and identifying individuals based on Short Tandem Repeats (STRs). Features profile database creation, STR analysis, individual identification, and relationship detection.
https://github.com/nivasharmaa/genetrack

data data-processing dna-analysis file-io-in-java genetic-analysis java-oop

Last synced: about 2 months ago
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Host: GitHub
URL: https://github.com/nivasharmaa/genetrack
Owner: nivasharmaa
Created: 2024-08-07T03:28:58.000Z (5 months ago)
Default Branch: main
Last Pushed: 2024-08-07T04:53:00.000Z (5 months ago)
Last Synced: 2024-08-08T08:19:13.496Z (5 months ago)
Topics: data, data-processing, dna-analysis, file-io-in-java, genetic-analysis, java-oop
Language: Java
Homepage:
Size: 7.81 KB
Stars: 0
Watchers: 1
Forks: 0
Open Issues: 0
Metadata Files:
- Readme: README.md

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README

# GeneTrack

## Overview
GeneTrack is a Java program designed to analyze DNA sequences and identify individuals based on Short Tandem Repeats (STRs). STRs are short DNA segments repeated back to back, and analyzing these can help identify genetic information and potential relationships. This program reads DNA profiles and STRs of interest from input files, processes the DNA data, and provides detailed analysis.

## Features
- **Profile Database Creation**: Reads and stores DNA profiles from a database file.
- **STR Analysis**: Analyzes DNA sequences to identify the occurrence of specific STRs.
- **Individual Identification**: Matches DNA profiles based on STR patterns to identify individuals.
- **Relationship Detection**: Identifies potential relationships based on shared STR patterns.

## Concepts Covered
- Object-Oriented Programming (OOP)
- File I/O Operations
- Genetic Analysis Algorithms
- Data Processing and Analysis