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https://github.com/njahn82/hoa_ta_effects

Source code supplement for hybrid open access study
https://github.com/njahn82/hoa_ta_effects

bibliometrics crossref openaccess openalex research-compendium

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Source code supplement for hybrid open access study

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# Source code supplement -- How open are hybrid journals included in transformative agreements?

## Overview

This repository provides data and code used for the preprint

Najko Jahn, 2024. *How open are hybrid journals included in transformative agreements?*

This repository is organized as a [research compendium](https://doi.org/10.7287/peerj.preprints.3192v2). A research compendium contains data, code, and text associated with it.

## Analysis files

### Main analysis

The [`analysis/`](analysis/) directory contains the manuscript written in R Markdown:

[`analysis/manuscript.Rmd`](analysis/manuscript.Rmd)

The R Markdown is rendered to a Latex document. See the rendered pdf [here](analysis/manuscript.pdf):

[{renv}](https://rstudio.github.io/renv/articles/renv.html) is used to create an reproducible environment for all the R packages used in the analysis.

### Data

#### {hoaddata}

Data is openly available through an R data package, [{hoaddata}](https://github.com/subugoe/hoaddata/releases/tag/v0.2.91).
{hoaddata} contains not only the datasets used in the data analysis.
It also includes code used to compile the data by connecting it to [a cloud-based Google Big Query data warehouse](https://subugoe.github.io/scholcomm_analytics/data.html), where scholarly big data from Crossref, OpenAlex and Unpaywall were imported.
To increase computational reproducibility, data aggregation through hoaddata was automatically carried out using GitHub Actions.

The main dataset, providing article-level data about publications linked to transformative agreements and institutions, is available as {hoaddata} release asset:


To install {hoaddata} version used with R

```r
library(remotes)
remotes::install_github("subugoe/[email protected]", dependencies = "Imports")
```

#### Figure data

All data underlying figure can be found in [`analysis/fig_data/`](analysis/fig_data/) folder.

### Contact

Najko Jahn, Data Analyst, SUB Göttingen. [email protected]