https://github.com/novartis/rescalestx

This is a package for rescaling coordinates for Visium 10x transcriptomics datasets. This enables the highest resolution (or an arbitrary resolution) of microscopy image to be used for STx analysis, which enables advanced image processing and machine-learning using image features and coordinates of spatial transcriptomics datasets
https://github.com/novartis/rescalestx

Last synced: 8 months ago
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This is a package for rescaling coordinates for Visium 10x transcriptomics datasets. This enables the highest resolution (or an arbitrary resolution) of microscopy image to be used for STx analysis, which enables advanced image processing and machine-learning using image features and coordinates of spatial transcriptomics datasets

• Host: GitHub
• URL: https://github.com/novartis/rescalestx
• Owner: Novartis
• License: mit
• Created: 2023-02-21T18:47:38.000Z (over 3 years ago)
• Default Branch: main
• Last Pushed: 2023-12-05T03:20:38.000Z (over 2 years ago)
• Last Synced: 2025-07-21T06:12:25.272Z (11 months ago)
• Language: Python
• Size: 5.86 KB
• Stars: 0
• Watchers: 3
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# RescaleSTx

This is a package for rescaling coordinates for Visium 10x transcriptomics datasets. This enables the highest resolution (or an arbitrary resolution) of microscopy image to be used for STx analysis,  which enables advanced image processing and machine-learning using image features and coordinates of spatial transcriptomics datasets