https://github.com/nyxflower/memo

Constraint-based metabolic modelling with sparse IPOPT
https://github.com/nyxflower/memo

constraint-based-modeling interior-point-optimizer metabolic-models non-linear-optimization

Last synced: 3 months ago
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Constraint-based metabolic modelling with sparse IPOPT

• Host: GitHub
• URL: https://github.com/nyxflower/memo
• Owner: NYXFLOWER
• License: mit
• Created: 2021-01-31T23:45:02.000Z (over 4 years ago)
• Default Branch: main
• Last Pushed: 2021-11-02T01:01:21.000Z (over 3 years ago)
• Last Synced: 2025-01-03T10:11:46.611Z (5 months ago)
• Topics: constraint-based-modeling, interior-point-optimizer, metabolic-models, non-linear-optimization
• Language: Python
• Homepage:
• Size: 34.2 KB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# MM

 Metabolic modeling with IPOPT

## Prerequisites

The code in the subfolder is mainly based on the [`cyipopt`](https://github.com/mechmotum/cyipopt) package, 

which is a Cython interface for the interior point optimizer.