https://github.com/obophenotype/porifera-ontology

An ontology covering the anatomy of Porifera (sponges)
https://github.com/obophenotype/porifera-ontology

anatomy anatomy-ontology evodevo metazoa obofoundry ontology porifera sponges

Last synced: about 1 month ago
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An ontology covering the anatomy of Porifera (sponges)

• Host: GitHub
• URL: https://github.com/obophenotype/porifera-ontology
• Owner: obophenotype
• Created: 2015-03-15T23:04:22.000Z (about 10 years ago)
• Default Branch: master
• Last Pushed: 2021-11-08T20:43:26.000Z (over 3 years ago)
• Last Synced: 2024-03-26T00:54:32.924Z (about 1 year ago)
• Topics: anatomy, anatomy-ontology, evodevo, metazoa, obofoundry, ontology, porifera, sponges
• Language: Vue
• Homepage:
• Size: 1010 KB
• Stars: 6
• Watchers: 16
• Forks: 1
• Open Issues: 11
• Metadata Files:
  • Readme: README.md

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README

        
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An ontology covering the anatomy of Porifera (sponges)

![fig1](http://www.jbiomedsem.com/content/figures/2041-1480-5-39-1.jpg)

(figure from Boury-Esnault N, Rützler K: Thesaurus of Sponge Morphology. Washington: Smithsonian Institution Press; 1997)

## Citing ##

Thacker, R. W., Díaz, M. C., Kerner, A., Vignes-Lebbe, R., Segerdell, E., Haendel, M. a, & Mungall, C. J. (2014). [The Porifera Ontology (PORO): enhancing sponge systematics with an anatomy ontology](http://www.jbiomedsem.com/content/5/1/39/abstract). _Journal of Biomedical Semantics_, 5(1), 39. doi:10.1186/2041-1480-5-39

## Browse ##

The ontology can be browsed in [OntoBee](http://www.ontobee.org/browser/index.php?o=PORO)

Example entry points:

  * http://purl.obolibrary.org/obo/PORO_0000017 spicule

  * http://purl.obolibrary.org/obo/PORO_0000029 spongin

## Download ##

This ontology is available from

  * http://purl.obolibrary.org/obo/poro.owl

  * http://purl.obolibrary.org/obo/poro.obo

## Organization ##

The upper level organization of PORO is described in the [Organization](Organization.md) document

## Source Material ##

See [SourceMaterial](SourceMaterial.md)

## Editors Guide ##

  * [PoroEditorsGuide](PoroEditorsGuide.md)