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https://github.com/omnideconv/immunedeconv

A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods
https://github.com/omnideconv/immunedeconv

Last synced: about 2 months ago
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A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods

Host: GitHub
URL: https://github.com/omnideconv/immunedeconv
Owner: omnideconv
License: other
Created: 2018-03-21T11:24:26.000Z (almost 7 years ago)
Default Branch: master
Last Pushed: 2024-05-06T17:06:30.000Z (8 months ago)
Last Synced: 2024-05-18T20:42:49.125Z (8 months ago)
Language: R
Homepage: https://omnideconv.org/immunedeconv/index.html
Size: 118 MB
Stars: 406
Watchers: 13
Forks: 97
Open Issues: 31
Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- License: LICENSE

Awesome Lists containing this project

Awesome-Bioinformatics-Benchmarks - R package called immunedeconv - lab/immune_deconvolution_benchmark) available so that others can reproduce/extend it to test their own tools/methods. (RNA-seq / Cell-Type Deconvolution)