https://github.com/open2c/bioframe-poster
https://open2c.github.io/bioframe-poster
https://github.com/open2c/bioframe-poster
Last synced: 12 months ago
JSON representation
https://open2c.github.io/bioframe-poster
- Host: GitHub
- URL: https://github.com/open2c/bioframe-poster
- Owner: open2c
- Created: 2022-06-29T17:30:55.000Z (almost 4 years ago)
- Default Branch: main
- Last Pushed: 2023-04-14T01:59:43.000Z (about 3 years ago)
- Last Synced: 2025-04-24T01:14:35.704Z (about 1 year ago)
- Language: Jupyter Notebook
- Homepage:
- Size: 70.5 MB
- Stars: 0
- Watchers: 7
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
Awesome Lists containing this project
README
# bioframe-poster
Scipy22 Virtual Poster
Setup:
```sh
pip install -r requirements.txt
```
Build slides:
```sh
make
```
Preprint on [bioRxiv](https://www.biorxiv.org/content/early/2022/02/19/2022.02.16.480748):
```bibtex
@article {bioframe2022,
author = {Open2C and Abdennur, Nezar and Fudenberg, Geoffrey and Flyamer, Ilya and Galitsyna, Aleksandra A. and Goloborodko, Anton and Imakaev, Maxim and Venev, Sergey V.},
title = {Bioframe: Operations on Genomic Intervals in Pandas Dataframes},
year = {2022},
doi = {10.1101/2022.02.16.480748},
publisher = {Cold Spring Harbor Laboratory},
URL = {https://www.biorxiv.org/content/early/2022/02/19/2022.02.16.480748},
eprint = {https://www.biorxiv.org/content/early/2022/02/19/2022.02.16.480748.full.pdf},
journal = {bioRxiv}
}
```
Special thanks to @manzt for the interactive app programming example notebook!