https://github.com/openemr/openemr-analytics

Medical analytics infrastructure for OpenEMR
https://github.com/openemr/openemr-analytics

Last synced: 5 days ago
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Medical analytics infrastructure for OpenEMR

• Host: GitHub
• URL: https://github.com/openemr/openemr-analytics
• Owner: openemr
• Created: 2017-08-15T21:20:44.000Z (about 7 years ago)
• Default Branch: master
• Last Pushed: 2018-01-31T19:46:06.000Z (almost 7 years ago)
• Last Synced: 2024-10-30T00:54:53.066Z (14 days ago)
• Language: Shell
• Size: 37.1 KB
• Stars: 5
• Watchers: 7
• Forks: 2
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# Shiny Analytics for OpenEMR

This is a testbed for shiny-driven analytics in OpenEMR.

## Prerequisites

Right now, just docker in a 64 bit environment.

## Getting Started

Clone this repo and cd into it. Run `./install-all.sh`, which will take a *long* time to first build the image, but should subsequently be fast when updating. You'll now have OpenEMR, Mysql, and a Shiny server running together.

## Adding Shiny Apps

Just drop them in the `shiny-server/server-contents` directory, which is available as the root directory of your shiny server (ie: `shiny-server/otdi/index.Rmd` will be available at `localhost:3838/otdi`)

Note: the host machine (with its delicious database of information) should be accessible as the host `mysql` from your shiny apps. 

## Adding dependencies

Add them in the Dockerfile, in either the 'install.packages' portion for R packages, or appended to an apt-get command if it is an ubuntu package.

## Using with existing OpenEMR installations

If you're using a docker-compose file to coordinate your existing OpenEMR installation, you can add the shiny segment from the docker-compose.yml included in the root of this repo, along with the shiny-server directory.