https://github.com/openpharma/clinsight

ClinSight - An application for medical monitoring within clinical trials
https://github.com/openpharma/clinsight

Last synced: 6 months ago
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ClinSight - An application for medical monitoring within clinical trials

• Host: GitHub
• URL: https://github.com/openpharma/clinsight
• Owner: openpharma
• License: other
• Created: 2024-05-02T12:40:43.000Z (about 1 year ago)
• Default Branch: main
• Last Pushed: 2024-12-13T13:51:19.000Z (6 months ago)
• Last Synced: 2024-12-13T14:27:25.655Z (6 months ago)
• Language: R
• Homepage: https://openpharma.github.io/clinsight/
• Size: 24.8 MB
• Stars: 3
• Watchers: 1
• Forks: 0
• Open Issues: 58
• Metadata Files:
  • Readme: README.md
  • Changelog: NEWS.md
  • License: LICENSE

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README

        

# ClinSight 

[![R-CMD-check](https://github.com/openpharma/clinsight/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/openpharma/clinsight/actions/workflows/R-CMD-check.yaml)

[![test-coverage](https://github.com/openpharma/clinsight/actions/workflows/test-coverage.yaml/badge.svg)](https://github.com/openpharma/clinsight/actions/workflows/test-coverage.yaml)

[![codecov](https://codecov.io/github/openpharma/clinsight/graph/badge.svg?token=T63MIKBP8L)](https://codecov.io/github/openpharma/clinsight)

The goal of `ClinSight` is to provide a consistent platform for monitoring patient safety during clinical

trials. 

The Shiny application in the `clinsight` package provides  

visualizations and timelines that simplify comparing multiple related data points 

within and between patients in a clinical trial. The app highlights new/updated data 

and shows the clinical significance, as reported by the responsible 

investigator/clinician, of each data point that is out of range.

Furthermore, the application contains a query system with audit trail and has an 

option to create PDF reports of monitoring activities. 

The application is modular and can be customized for specific studies using a 

metadata Excel file, that controls which data will be shown in which 

tab/form in the application.

## Installation

You can install the development version of ClinSight from 

[GitHub](https://github.com/) with:

```

# install.packages("devtools")

remotes::install_github("openpharma/clinsight")

```

To run the application with the intended R environment, you should first open 

the project (clinsight.Rproj) and then restore the project environment:

```

renv::restore()

```

After all the required packages are successfully installed, the application can 

be run in development mode using the following code:

``` 

golem::run_dev()

```

More information will follow here.