https://github.com/pacificcommunity/seapodym-parallel

Code development of population dynamics models aka SEAPODYM with parallel runs and parameter estimations
https://github.com/pacificcommunity/seapodym-parallel

ofp parallel seapodym

Last synced: 7 months ago
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Code development of population dynamics models aka SEAPODYM with parallel runs and parameter estimations

• Host: GitHub
• URL: https://github.com/pacificcommunity/seapodym-parallel
• Owner: PacificCommunity
• License: bsd-3-clause
• Created: 2025-05-20T07:55:02.000Z (10 months ago)
• Default Branch: main
• Last Pushed: 2025-08-12T00:05:02.000Z (7 months ago)
• Last Synced: 2025-08-12T01:27:35.645Z (7 months ago)
• Topics: ofp, parallel, seapodym
• Language: C++
• Homepage: https://pacificcommunity.github.io/seapodym-parallel/
• Size: 1.69 MB
• Stars: 0
• Watchers: 6
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
![Build and test](https://github.com/PacificCommunity/seapodym-parallel/actions/workflows/build.yml/badge.svg)

# seapodym-parallel

Code development of population dynamics models aka SEAPODYM with parallel runs and parameter estimations

## Prerequisites

You will need:

 * A C++ compiler (e.g. g++) and MPI libraries installed (e.g. OpenMPI)

 * CMake

 * ADMB

 * [spdlog](https://github.com/gabime/spdlog)

## How to build the seapodym-parallel

```

git clone  git@github.com:PacificCommunity/seapodym-parallel

cd seapodym-parallel

mkdir build

cd build

cmake -DADMB_HOME=path ..

cmake --build .

```

## How to build the documention

In the build directory

```

cmake --build . --target doc_doxygen

```

This will generate the documention in the top source directory `docs`. 

## Documentation

Documentation is built and pushed after every code change to [here](https://pacificcommunity.github.io/seapodym-parallel/).

## How to test the code

In the build directory

```

ctest

```