https://github.com/paris-saclay-cds/specio

specio: Python input/output for spectroscopic files
https://github.com/paris-saclay-cds/specio

chemistry hyperspectral python raman

Last synced: 3 months ago
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specio: Python input/output for spectroscopic files

• Host: GitHub
• URL: https://github.com/paris-saclay-cds/specio
• Owner: paris-saclay-cds
• License: bsd-3-clause
• Created: 2017-07-10T12:44:23.000Z (over 7 years ago)
• Default Branch: master
• Last Pushed: 2023-06-26T23:06:22.000Z (over 1 year ago)
• Last Synced: 2024-04-30T04:20:47.875Z (6 months ago)
• Topics: chemistry, hyperspectral, python, raman
• Language: Python
• Homepage: http://specio.readthedocs.io/
• Size: 48.9 MB
• Stars: 19
• Watchers: 5
• Forks: 13
• Open Issues: 7
• Metadata Files:
  • Readme: README.rst
  • License: LICENSE

Awesome Lists containing this project

• awesome-spectra - specio

README

        
.. -*- mode: rst -*-

|Travis|_ |AppVeyor|_ |Codecov|_ |ReadTheDocs|_ |PythonVersion|_ |Pypi|_

.. |Travis| image:: https://travis-ci.org/paris-saclay-cds/specio.svg?branch=master

.. _Travis: https://travis-ci.org/paris-saclay-cds/specio

.. |AppVeyor| image:: https://ci.appveyor.com/api/projects/status/pvkh4hic8rpxcoyn?svg=true

.. _AppVeyor: https://ci.appveyor.com/project/paris-saclay-cds/specio/history

.. |Codecov| image:: https://codecov.io/gh/paris-saclay-cds/specio/branch/master/graph/badge.svg

.. _Codecov: https://codecov.io/gh/paris-saclay-cds/specio

.. |ReadTheDocs| image:: https://readthedocs.org/projects/specio/badge/?version=latest

.. _ReadTheDocs: http://specio.readthedocs.io/en/latest/?badge=latest

.. |PythonVersion| image:: https://img.shields.io/pypi/pyversions/specio.svg

.. _PythonVersion: https://img.shields.io/pypi/pyversions/specio.svg

.. |Pypi| image:: https://badge.fury.io/py/specio.svg

.. _Pypi: https://badge.fury.io/py/specio

specio

======

specio is a library which allows to easily open spectroscopic format currently

available. It is widely inspired by the `imageio

`_ architecture.

Documentation

-------------

Installation documentation, API documentation, and examples can be found on the

documentation_.

.. _documentation: http://specio.readthedocs.io/

Installation

------------

Dependencies

~~~~~~~~~~~~

The following dependencies are mandatory:

* numpy

* six

In addition, there is the following optional dependencies required by some

readers and to export into CSV:

* pandas

* spc

* pyopenms

You can install all these dependencies via pip::

  pip install -r requirements.txt

User installation

~~~~~~~~~~~~~~~~~

You can install the package using pip and the PyPi repository::

  pip install -U specio

Alternatively, you can clone it and run the setup.py file. Use the following

commands to get a copy from Github and install::

  git clone https://github.com/paris-saclay-cds/specio.git

  cd specio

  pip install .

You can also install the master branch directly with pip::

  pip install git+https://github.com/paris-saclay-cds/specio.git