https://github.com/pathwayforte/reproducibility-survey

Evaluating the reprodubility of top-ranked publications
https://github.com/pathwayforte/reproducibility-survey

enrichment-analysis pathways reproducible-research

Last synced: 4 months ago
JSON representation

Evaluating the reprodubility of top-ranked publications

• Host: GitHub
• URL: https://github.com/pathwayforte/reproducibility-survey
• Owner: pathwayforte
• License: apache-2.0
• Created: 2019-07-04T11:25:07.000Z (almost 6 years ago)
• Default Branch: master
• Last Pushed: 2019-11-22T08:13:10.000Z (over 5 years ago)
• Last Synced: 2025-01-15T11:09:13.555Z (5 months ago)
• Topics: enrichment-analysis, pathways, reproducible-research
• Language: Jupyter Notebook
• Homepage:
• Size: 1.54 MB
• Stars: 1
• Watchers: 5
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: README.rst
  • License: LICENSE

Awesome Lists containing this project

README

        
Reproducibility Survey on Pathway-based Papers

==============================================

1. We gathered a list of high-impact publications using over-enrichment

   analysis (ORA), functional class scoring (FCS), and pathway topology (PT)

   methods in https://github.com/pathwayforte/reproducibility-survey/blob/master/survey.tsv

Queries to find new publications

--------------------------------

https://www.nature.com/search?q=pathway&order=date_desc&article_type=research%2Creviews%2Cprotocols&subject=computational-biology-and-bioinformatics