https://github.com/paulsengroup/modle

High-performance stochastic modeling of DNA loop extrusion interactions
https://github.com/paulsengroup/modle

bioinformatics biology cpp cpp17 dna hic high-performance loop-extrusion stochastic-model tad topologically-associated-domains

Last synced: 3 months ago
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High-performance stochastic modeling of DNA loop extrusion interactions

• Host: GitHub
• URL: https://github.com/paulsengroup/modle
• Owner: paulsengroup
• License: other
• Created: 2022-03-05T14:19:15.000Z (about 4 years ago)
• Default Branch: main
• Last Pushed: 2025-12-22T11:04:06.000Z (4 months ago)
• Last Synced: 2026-01-11T14:14:41.565Z (3 months ago)
• Topics: bioinformatics, biology, cpp, cpp17, dna, hic, high-performance, loop-extrusion, stochastic-model, tad, topologically-associated-domains
• Language: C++
• Homepage: https://doi.org/10.1186/s13059-022-02815-7
• Size: 65.2 MB
• Stars: 18
• Watchers: 2
• Forks: 3
• Open Issues: 4
• Metadata Files:
  • Readme: README.md
  • License: LICENSE
  • Citation: CITATION.cff

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