https://github.com/pbs-assess/lingcod-inside

Stock Assessment for Inside Lingcod Stock in British Columbia
https://github.com/pbs-assess/lingcod-inside

Last synced: 3 days ago
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Stock Assessment for Inside Lingcod Stock in British Columbia

• Host: GitHub
• URL: https://github.com/pbs-assess/lingcod-inside
• Owner: pbs-assess
• Created: 2024-01-22T16:43:54.000Z (12 months ago)
• Default Branch: main
• Last Pushed: 2024-11-07T20:13:32.000Z (2 months ago)
• Last Synced: 2024-11-07T20:38:47.555Z (2 months ago)
• Language: R
• Size: 957 KB
• Stars: 0
• Watchers: 14
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.Rmd

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README

        
---

output: github_document

---

```{r setup, include=FALSE}

knitr::opts_chunk$set(echo = TRUE)

```

# Inside Lingcod Stock Assessment for British Columbia

## Install dependencies

### GitHub R packages

```{r github-packages, eval=FALSE}

# install.packages("remotes")

remotes::install_github("pbs-assess/gfdata")

remotes::install_github("pbs-assess/gfplot")

remotes::install_github("r4ss/r4ss")

remotes::install_github("Cole-Monnahan-NOAA/adnuts")

remotes::install_github("PIFSCstockassessments/ss3diags")

```

### Stock Synthesis 3.30

- Download the latest release of [Stock Synthesis 3.30](https://github.com/nmfs-ost/ss3-source-code?tab=readme-ov-file)

- Confirm that the ss3 executable is available in the R `$PATH`, for example using `r4ss::check_exe()`