https://github.com/pdbeurope/pdb-topology-viewer

PDB Topology Viewer
https://github.com/pdbeurope/pdb-topology-viewer

Last synced: 6 months ago
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PDB Topology Viewer

• Host: GitHub
• URL: https://github.com/pdbeurope/pdb-topology-viewer
• Owner: PDBeurope
• License: apache-2.0
• Created: 2016-09-08T15:37:17.000Z (about 9 years ago)
• Default Branch: master
• Last Pushed: 2023-10-10T17:31:09.000Z (almost 2 years ago)
• Last Synced: 2025-03-26T02:42:53.469Z (6 months ago)
• Language: TypeScript
• Homepage: http://pdbe.org
• Size: 1020 KB
• Stars: 5
• Watchers: 2
• Forks: 4
• Open Issues: 17
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# PDB Topology Viewer

[![NPM version](http://img.shields.io/npm/v/pdb-topology-viewer.svg)](https://www.npmjs.org/package/pdb-topology-viewer) 

The topology viewer depicts the secondary structure of a protein in a 2D representation, taking into account the interactions of these secondary structure elements. This leads to a consistent display of sheets and domains in the structure. For PDB entries with multiple copies of a protein, the best chain is used. The topology viewer also depicts value-added annotation from SIFTS including residue-level mapping to UniProt, sequence families (Pfam), structure domains (SCOP, CATH) and structure quality from wwPDB validation reports.

It is a PDB Component Library component.

![PDB Topology Viewer](/images/pdb-topology-viewer.png)

## Getting Started

**Refer [PDB Topology Viewer Wiki](https://github.com/PDBeurope/pdb-topology-viewer/wiki) for detailed documentation and examples**

## Contact

Please use github to report **bugs**, discuss potential **new features** or **ask questions** in general. Also you can contact us here for support, feedback or to report any issues.

## License

The plugin is released under the Apache License Version 2.0. You can find out more about it at http://www.apache.org/licenses/LICENSE-2.0 or within the license file of the repository.

## If you are interested in this plugin...

...you might also want to have a look at the PDB Component Library.

"# pdb-topology-viewer"