https://github.com/pditommaso/nf-sandbox

https://github.com/pditommaso/nf-sandbox

Last synced: 21 days ago
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• Host: GitHub
• URL: https://github.com/pditommaso/nf-sandbox
• Owner: pditommaso
• License: apache-2.0
• Created: 2018-05-24T21:48:02.000Z (over 6 years ago)
• Default Branch: master
• Last Pushed: 2018-07-24T20:03:51.000Z (over 6 years ago)
• Last Synced: 2024-10-15T09:56:12.984Z (2 months ago)
• Language: Java
• Size: 486 KB
• Stars: 1
• Watchers: 3
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# NF SANDBOX

Sandbox for a [GA4GH](https://github.com/ga4gh/workflow-execution-service-schemas/) back-end implementation.

Service model was generated using the following swagger definition:

https://raw.githubusercontent.com/ga4gh/workflow-execution-service-schemas/0f20538/swagger/proto/workflow_execution.swagger.json

To update the model:

1) Go to https://editor.swagger.io

2) Use the menu command "File > Import URL"

3) Then use the command "Generate Client > jaxrs-cfx-client"

4) Unzip the downloaded package and copy the model classes

## Get started

To run unit tests use

```

./gradlew test

```

To run the local server use:

```

make run

```

Default port is 8080. To change check the file `src/main/resources/application.groovy`

The fun part is at these files:

```

./src/main/groovy/ga4gh/WesController.groovy

./src/test/groovy/ga4gh/WesControllerTest.groovy

```

## Hot reloading

To automatically reload class, resources changes without having to stop, compile and relaunch

the application use the command `make hotreload`, after `make run`.

For details see [Micronaut reloading](https://docs.micronaut.io/latest/guide/index.html#reloading).